The 2.0 version of rSNPBase

Variant report

Variant rs4401107
Chromosome Location chr18:45530683-45530684
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:45525200-45531200 Enhancers Primary hematopoietic stem cells short term culture blood
2 chr18:45527200-45530800 Weak transcription Primary hematopoietic stem cells blood
3 chr18:45528400-45531200 Enhancers Placenta Placenta
4 chr18:45528600-45531400 Enhancers Fetal Adrenal Gland Adrenal Gland
5 chr18:45528800-45530800 Enhancers Skeletal Muscle Male skeletal muscle
6 chr18:45528800-45531200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr18:45529000-45530800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr18:45529000-45530800 Enhancers Rectal Mucosa Donor 31 rectum
9 chr18:45529000-45530800 Enhancers Right Ventricle heart
10 chr18:45529000-45531000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
11 chr18:45529000-45531000 Enhancers NHEK skin
12 chr18:45529000-45531200 Enhancers Breast Myoepithelial Primary Cells Breast
13 chr18:45529000-45531200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr18:45529000-45531200 Enhancers Fetal Muscle Leg muscle
15 chr18:45529000-45531200 Enhancers HUVEC blood vessel
16 chr18:45529000-45531400 Enhancers Dnd41 blood
17 chr18:45529200-45530800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr18:45529200-45530800 Enhancers Fetal Muscle Trunk muscle
19 chr18:45529200-45530800 Enhancers Pancreas Pancrea
20 chr18:45529200-45531000 Enhancers Muscle Satellite Cultured Cells --
21 chr18:45529200-45531000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr18:45529200-45531000 Enhancers HSMMtube muscle
23 chr18:45529200-45531200 Enhancers Right Atrium heart
24 chr18:45529200-45531200 Enhancers HSMM muscle
25 chr18:45529200-45531400 Enhancers Fetal Thymus thymus
26 chr18:45529200-45531400 Enhancers HMEC breast
27 chr18:45529400-45530800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
28 chr18:45529400-45531000 Enhancers NH-A brain
29 chr18:45529400-45532800 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr18:45529400-45533000 Weak transcription H1 Cell Line embryonic stem cell
31 chr18:45529600-45530800 Enhancers Duodenum Mucosa Duodenum
32 chr18:45529600-45530800 Enhancers Osteobl bone
33 chr18:45529600-45531000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr18:45529600-45531000 Flanking Active TSS Hela-S3 cervix
35 chr18:45529600-45531200 Enhancers Thymus Thymus
36 chr18:45529600-45533000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr18:45529800-45530800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr18:45529800-45530800 Enhancers Spleen Spleen
39 chr18:45529800-45531000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr18:45530000-45530800 Enhancers Primary monocytes fromperipheralblood blood
41 chr18:45530000-45530800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
42 chr18:45530000-45530800 Enhancers A549 lung
43 chr18:45530000-45531200 Enhancers Primary Natural Killer cells fromperipheralblood blood
44 chr18:45530200-45530800 Enhancers Monocytes-CD14+_RO01746 blood
45 chr18:45530200-45531200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr18:45530400-45534200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr18:45530400-45534200 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr18:45530400-45534200 Weak transcription Psoas Muscle Psoas
49 chr18:45530400-45534400 Weak transcription Aorta Aorta
50 chr18:45530400-45534400 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015