The 2.0 version of rSNPBase

Variant report

Variant rs4436353
Chromosome Location chr1:224505719-224505720
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224433400-224516200 Weak transcription Fetal Heart heart
2 chr1:224475600-224505800 Strong transcription HUES48 Cell Line embryonic stem cell
3 chr1:224476000-224506200 Strong transcription HUES64 Cell Line embryonic stem cell
4 chr1:224476600-224506200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:224477400-224505800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:224482800-224517000 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr1:224483800-224517200 Weak transcription Small Intestine intestine
8 chr1:224487400-224515600 Weak transcription Psoas Muscle Psoas
9 chr1:224491800-224511200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr1:224491800-224515600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:224491800-224516200 Weak transcription Fetal Brain Male brain
12 chr1:224491800-224516400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:224491800-224516600 Weak transcription Rectal Smooth Muscle rectum
14 chr1:224492000-224513400 Weak transcription Lung lung
15 chr1:224492400-224516400 Weak transcription Placenta Amnion Placenta Amnion
16 chr1:224493200-224514400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr1:224495200-224515600 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr1:224495400-224516600 Weak transcription Esophagus oesophagus
19 chr1:224495400-224516800 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr1:224496000-224509800 Weak transcription Spleen Spleen
21 chr1:224496000-224515400 Weak transcription Colon Smooth Muscle Colon
22 chr1:224496000-224515600 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr1:224496000-224516200 Weak transcription Brain Substantia Nigra brain
24 chr1:224496000-224516200 Weak transcription NHDF-Ad bronchial
25 chr1:224496000-224516400 Weak transcription Brain Anterior Caudate brain
26 chr1:224496000-224516400 Weak transcription Colonic Mucosa Colon
27 chr1:224496000-224517000 Weak transcription H9 Cell Line embryonic stem cell
28 chr1:224497000-224516200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr1:224497000-224516400 Weak transcription NHLF lung
30 chr1:224498000-224517000 Weak transcription Brain Angular Gyrus brain
31 chr1:224498000-224517200 Weak transcription Aorta Aorta
32 chr1:224498200-224512200 Weak transcription Fetal Brain Female brain
33 chr1:224498600-224516400 Weak transcription Brain Hippocampus Middle brain
34 chr1:224498800-224505800 Strong transcription HUVEC blood vessel
35 chr1:224499000-224515400 Weak transcription Brain Cingulate Gyrus brain
36 chr1:224499400-224506400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr1:224499400-224516400 Weak transcription Thymus Thymus
38 chr1:224499800-224515400 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr1:224500200-224515400 Weak transcription HMEC breast
40 chr1:224500200-224515600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:224501600-224516400 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr1:224502000-224506200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr1:224502400-224514600 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr1:224502800-224505800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr1:224502800-224505800 Strong transcription Osteobl bone
46 chr1:224503200-224505800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:224503800-224516200 Weak transcription NH-A brain
48 chr1:224504200-224507600 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr1:224504200-224516200 Weak transcription Fetal Lung lung
50 chr1:224504200-224516600 Weak transcription Ovary ovary

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Last update: Aug 31, 2015