The 2.0 version of rSNPBase

Variant report

Variant rs6682432
Chromosome Location chr1:224352120-224352121
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224303000-224363400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:224316600-224352200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:224327600-224356400 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr1:224339200-224363200 Weak transcription Brain Angular Gyrus brain
5 chr1:224345400-224352200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr1:224345400-224363400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:224345600-224363400 Weak transcription Ovary ovary
8 chr1:224345800-224356600 Weak transcription Small Intestine intestine
9 chr1:224346000-224356600 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr1:224346200-224356000 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr1:224346200-224356600 Weak transcription NHLF lung
12 chr1:224346400-224356600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr1:224346400-224370000 Weak transcription Esophagus oesophagus
14 chr1:224346600-224356400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr1:224346600-224356400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr1:224346600-224356400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:224346600-224356600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr1:224346600-224356600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr1:224346600-224356600 Weak transcription Aorta Aorta
20 chr1:224346600-224356600 Weak transcription Brain Hippocampus Middle brain
21 chr1:224346600-224356600 Weak transcription Placenta Amnion Placenta Amnion
22 chr1:224346600-224356600 Weak transcription Thymus Thymus
23 chr1:224346600-224356600 Weak transcription HSMMtube muscle
24 chr1:224346600-224358200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr1:224346600-224363200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr1:224346600-224363200 Weak transcription Fetal Stomach stomach
27 chr1:224346600-224363400 Weak transcription Right Ventricle heart
28 chr1:224346600-224363400 Weak transcription Spleen Spleen
29 chr1:224346800-224352200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:224346800-224356400 Weak transcription Primary hematopoietic stem cells blood
31 chr1:224346800-224356400 Weak transcription NHEK skin
32 chr1:224346800-224356600 Weak transcription H9 Cell Line embryonic stem cell
33 chr1:224346800-224356600 Weak transcription Fetal Muscle Leg muscle
34 chr1:224346800-224356600 Weak transcription Psoas Muscle Psoas
35 chr1:224347000-224352400 Weak transcription Brain Germinal Matrix brain
36 chr1:224347000-224356200 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr1:224347200-224356400 Weak transcription HepG2 liver
38 chr1:224347200-224356600 Weak transcription GM12878-XiMat blood
39 chr1:224347400-224356000 Weak transcription Fetal Muscle Trunk muscle
40 chr1:224347600-224356000 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr1:224347600-224356400 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr1:224347600-224356400 Weak transcription Muscle Satellite Cultured Cells --
43 chr1:224348000-224356600 Weak transcription HMEC breast
44 chr1:224348000-224356600 Weak transcription NHDF-Ad bronchial
45 chr1:224348200-224356200 Weak transcription Primary T cells fromperipheralblood blood
46 chr1:224348200-224356400 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr1:224348200-224356400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr1:224348200-224356600 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr1:224348200-224356600 Weak transcription Rectal Smooth Muscle rectum
50 chr1:224348200-224358000 Weak transcription Hela-S3 cervix

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Last update: Aug 31, 2015