Variant report

Variant	rs4531326
Chromosome Location	chrX:137914664-137914665
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11211420	0.81[AMR][1000 genomes]
rs11211424	0.81[AMR][1000 genomes]
rs11582907	0.86[AMR][1000 genomes]
rs11584372	0.81[AMR][1000 genomes]
rs11584400	0.81[AMR][1000 genomes]
rs11588382	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11589237	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12406683	0.81[AMR][1000 genomes]
rs12408938	0.81[AMR][1000 genomes]
rs12564103	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17102978	0.81[AMR][1000 genomes]
rs2202221	0.81[AMR][1000 genomes]
rs2202222	0.81[AMR][1000 genomes]
rs2221324	0.81[AMR][1000 genomes]
rs2236332	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2292059	0.81[AMR][1000 genomes]
rs2292060	0.81[AMR][1000 genomes]
rs3920100	0.81[AMR][1000 genomes]
rs4926919	0.81[AMR][1000 genomes]
rs55694114	0.81[AMR][1000 genomes]
rs59244133	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs61165610	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6668901	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs74073884	0.81[AMR][1000 genomes]
rs74073885	0.81[AMR][1000 genomes]
rs74074332	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs74074335	0.86[AMR][1000 genomes]
rs741957	0.81[AMR][1000 genomes]
rs7549836	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9699991	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv525867	chrX:137580983-138439843	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:137885600-137940200	Weak transcription	K562	blood

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