The 2.0 version of rSNPBase

Variant report

Variant rs45470505
Chromosome Location chr14:65010290-65010291
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:65005800-65011600 Active TSS Brain Anterior Caudate brain
2 chr14:65005800-65012000 Active TSS Brain Angular Gyrus brain
3 chr14:65005800-65012000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
4 chr14:65006000-65010400 Active TSS Aorta Aorta
5 chr14:65006000-65011400 Active TSS Colon Smooth Muscle Colon
6 chr14:65006000-65012000 Active TSS Brain Substantia Nigra brain
7 chr14:65006400-65012000 Active TSS Brain Cingulate Gyrus brain
8 chr14:65006400-65012400 Active TSS Brain Hippocampus Middle brain
9 chr14:65007600-65010600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
10 chr14:65008200-65011200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr14:65008200-65011800 Active TSS Brain Inferior Temporal Lobe brain
12 chr14:65008600-65010400 Active TSS Rectal Mucosa Donor 29 rectum
13 chr14:65008600-65010400 Active TSS Stomach Smooth Muscle stomach
14 chr14:65008600-65016200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr14:65008800-65011600 Active TSS Duodenum Smooth Muscle Duodenum
16 chr14:65009000-65010400 Active TSS Rectal Smooth Muscle rectum
17 chr14:65009000-65010800 Active TSS ES-I3 Cell Line embryonic stem cell
18 chr14:65009000-65011000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr14:65009000-65016200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr14:65009200-65010400 Active TSS Rectal Mucosa Donor 31 rectum
21 chr14:65009200-65010400 Active TSS Right Atrium heart
22 chr14:65009200-65010600 Active TSS iPS-18 Cell Line embryonic stem cell
23 chr14:65009200-65011000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr14:65009200-65011400 Active TSS ES-WA7 Cell Line embryonic stem cell
25 chr14:65009200-65011600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
26 chr14:65009200-65012200 Active TSS iPS-15b Cell Line embryonic stem cell
27 chr14:65009400-65010800 Active TSS A549 lung
28 chr14:65009400-65011200 Active TSS NHLF lung
29 chr14:65009400-65011600 Active TSS Skeletal Muscle Male skeletal muscle
30 chr14:65009400-65012000 Active TSS H1 Cell Line embryonic stem cell
31 chr14:65009400-65013000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
32 chr14:65009400-65016600 Weak transcription Gastric stomach
33 chr14:65009600-65011000 Active TSS HUES48 Cell Line embryonic stem cell
34 chr14:65009600-65011200 Active TSS Brain Germinal Matrix brain
35 chr14:65009600-65011400 Active TSS HUES6 Cell Line embryonic stem cell
36 chr14:65009600-65012000 Active TSS Skeletal Muscle Female skeletal muscle
37 chr14:65009600-65016200 Weak transcription H9 Cell Line embryonic stem cell
38 chr14:65009800-65010600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
39 chr14:65009800-65012200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
40 chr14:65010000-65010600 Flanking Bivalent TSS/Enh HUES64 Cell Line embryonic stem cell
41 chr14:65010000-65010600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr14:65010200-65010400 Flanking Active TSS Pancreatic Islets Pancreatic Islet
43 chr14:65010200-65010600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
44 chr14:65010200-65010600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr14:65010200-65010800 Weak transcription NHDF-Ad bronchial
46 chr14:65010200-65011000 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr14:65010200-65015600 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015