The 2.0 version of rSNPBase

Variant report

Variant rs57528409
Chromosome Location chr14:64915945-64915946
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:64856200-64931200 Weak transcription Stomach Mucosa stomach
2 chr14:64861800-64931600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr14:64867200-64927000 Strong transcription iPS-20b Cell Line embryonic stem cell
4 chr14:64867200-64929600 Strong transcription Dnd41 blood
5 chr14:64874000-64928400 Strong transcription HUES48 Cell Line embryonic stem cell
6 chr14:64877000-64927000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr14:64877000-64929400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr14:64877400-64928200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr14:64877800-64929200 Strong transcription H1 Cell Line embryonic stem cell
10 chr14:64878200-64921200 Strong transcription Liver Liver
11 chr14:64881600-64929000 Strong transcription Fetal Thymus thymus
12 chr14:64888000-64923000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr14:64888400-64920400 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr14:64891200-64928600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr14:64898600-64916000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr14:64900400-64931800 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr14:64905200-64920200 Weak transcription Psoas Muscle Psoas
18 chr14:64905800-64917000 Strong transcription NHEK skin
19 chr14:64905800-64931400 Weak transcription Placenta Amnion Placenta Amnion
20 chr14:64907400-64920200 Weak transcription Brain Substantia Nigra brain
21 chr14:64907800-64921400 Weak transcription Fetal Brain Male brain
22 chr14:64909400-64921200 Weak transcription Right Ventricle heart
23 chr14:64910600-64916000 Enhancers Primary Natural Killer cells fromperipheralblood blood
24 chr14:64910600-64931200 Weak transcription Fetal Heart heart
25 chr14:64911200-64921200 Weak transcription Colonic Mucosa Colon
26 chr14:64911200-64931400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr14:64911600-64916200 Weak transcription Esophagus oesophagus
28 chr14:64911800-64920600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr14:64911800-64931400 Weak transcription Colon Smooth Muscle Colon
30 chr14:64912000-64920400 Weak transcription Spleen Spleen
31 chr14:64912200-64916200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr14:64912200-64916200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr14:64912200-64929600 Strong transcription HUES6 Cell Line embryonic stem cell
34 chr14:64912400-64919600 Weak transcription Rectal Smooth Muscle rectum
35 chr14:64912400-64923600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr14:64912400-64925000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr14:64912400-64930200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr14:64912600-64917000 Weak transcription NHDF-Ad bronchial
39 chr14:64912600-64919000 Weak transcription Fetal Kidney kidney
40 chr14:64912600-64923400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr14:64912600-64926800 Strong transcription HUES64 Cell Line embryonic stem cell
42 chr14:64912600-64929600 Strong transcription Primary hematopoietic stem cells short term culture blood
43 chr14:64912800-64917000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr14:64913200-64916000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr14:64913200-64916200 Weak transcription NH-A brain
46 chr14:64913200-64916800 Weak transcription Muscle Satellite Cultured Cells --
47 chr14:64913200-64923200 Strong transcription Fetal Intestine Small intestine
48 chr14:64913400-64929600 Strong transcription Fetal Stomach stomach
49 chr14:64913600-64919600 Strong transcription Fetal Muscle Leg muscle
50 chr14:64913600-64929000 Strong transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015