The 2.0 version of rSNPBase

Variant report

Variant rs45493098
Chromosome Location chr10:90707397-90707398
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:90692400-90711000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr10:90694600-90707400 Strong transcription HSMMtube muscle
3 chr10:90695600-90710200 Weak transcription NHEK skin
4 chr10:90695600-90710800 Weak transcription Brain Cingulate Gyrus brain
5 chr10:90695800-90707400 Strong transcription Fetal Intestine Large intestine
6 chr10:90695800-90708200 Weak transcription Liver Liver
7 chr10:90695800-90708400 Weak transcription Fetal Heart heart
8 chr10:90695800-90709800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr10:90695800-90709800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr10:90695800-90709800 Weak transcription HMEC breast
11 chr10:90695800-90710000 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr10:90695800-90710000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr10:90695800-90710800 Weak transcription Brain Hippocampus Middle brain
14 chr10:90695800-90710800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr10:90695800-90711000 Weak transcription Brain Angular Gyrus brain
16 chr10:90695800-90711200 Weak transcription Brain Inferior Temporal Lobe brain
17 chr10:90695800-90720800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr10:90699000-90724200 Weak transcription Small Intestine intestine
19 chr10:90699400-90710000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr10:90699400-90715400 Weak transcription HepG2 liver
21 chr10:90699600-90710800 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr10:90699600-90712200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr10:90699600-90721800 Weak transcription Fetal Thymus thymus
24 chr10:90699800-90709800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr10:90699800-90710000 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr10:90699800-90710000 Weak transcription Right Ventricle heart
27 chr10:90700000-90712000 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr10:90700400-90709800 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr10:90701200-90709400 Weak transcription Muscle Satellite Cultured Cells --
30 chr10:90701200-90710400 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr10:90701200-90710800 Weak transcription Adipose Nuclei Adipose
32 chr10:90701400-90720800 Weak transcription Primary T cells from cord blood blood
33 chr10:90701600-90711600 Weak transcription Esophagus oesophagus
34 chr10:90701800-90708600 Weak transcription Gastric stomach
35 chr10:90701800-90709800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr10:90702000-90709800 Weak transcription Duodenum Mucosa Duodenum
37 chr10:90702400-90709800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr10:90703400-90708800 Transcr. at gene 5' and 3' Stomach Smooth Muscle stomach
39 chr10:90703600-90708600 Weak transcription Lung lung
40 chr10:90703600-90709000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr10:90703600-90710000 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr10:90703600-90710000 Weak transcription Colonic Mucosa Colon
43 chr10:90703600-90711600 Weak transcription Spleen Spleen
44 chr10:90703800-90709800 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr10:90703800-90711600 Weak transcription Pancreas Pancrea
46 chr10:90704000-90710800 Weak transcription Left Ventricle heart
47 chr10:90704000-90711600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr10:90704000-90721400 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr10:90704200-90710800 Weak transcription Placenta Placenta
50 chr10:90704800-90709800 Weak transcription HSMM muscle

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Last update: Aug 31, 2015