Variant report

No data

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:66949252..66949997-chr8:67333809..67334625,2	MCF-7	breast:
2	chr8:66949004..66949653-chr8:66976603..66977471,2	MCF-7	breast:
3	chr8:66948816..66949782-chr8:67089075..67089736,3	MCF-7	breast:
4	chr8:66949056..66952005-chr8:67340910..67342577,2	MCF-7	breast:
5	chr8:66947493..66949829-chr8:67023657..67026093,2	K562	blood:
6	chr8:66948642..66949409-chr8:67341025..67342128,4	MCF-7	breast:
7	chr8:66946238..66950362-chr8:67025196..67028717,4	MCF-7	breast:
8	chr8:66948854..66949575-chr8:67333726..67334881,3	K562	blood:
9	chr8:66947582..66951459-chr8:67339934..67342685,5	MCF-7	breast:
10	chr8:66948770..66951208-chr8:67340566..67342252,3	K562	blood:

No data

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs16932426	0.91[ASN][1000 genomes]
rs16932433	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17307227	0.91[ASN][1000 genomes]
rs2357571	0.91[ASN][1000 genomes]
rs4380923	0.91[ASN][1000 genomes]
rs4495411	0.91[ASN][1000 genomes]
rs58902647	0.91[ASN][1000 genomes]
rs62506635	0.81[ASN][1000 genomes]
rs62506642	0.86[ASN][1000 genomes]
rs62506643	0.86[ASN][1000 genomes]
rs62506644	0.81[ASN][1000 genomes]
rs62506646	0.91[ASN][1000 genomes]
rs62507392	0.91[ASN][1000 genomes]
rs6985796	0.91[ASN][1000 genomes]
rs7006334	0.91[ASN][1000 genomes]
rs7011399	0.81[ASN][1000 genomes]
rs7016694	0.86[ASN][1000 genomes]
rs73241293	0.82[AFR][1000 genomes]
rs73241296	0.82[AFR][1000 genomes]
rs7823449	0.91[ASN][1000 genomes]
rs7836993	0.91[ASN][1000 genomes]
rs7846530	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66939600-66952800	Weak transcription	Psoas Muscle	Psoas
2	chr8:66945600-66951200	Weak transcription	Pancreas	Pancrea
3	chr8:66946000-66951000	Weak transcription	Stomach Mucosa	stomach
4	chr8:66946400-66949400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr8:66946400-66955000	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr8:66946600-66953800	Weak transcription	NHDF-Ad	bronchial
7	chr8:66946600-66954000	Weak transcription	HMEC	breast
8	chr8:66947000-66954000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr8:66948000-66951400	Enhancers	A549	lung
10	chr8:66948400-66949400	Enhancers	Hela-S3	cervix
11	chr8:66948600-66949400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr8:66948600-66949400	Enhancers	GM12878-XiMat	blood
13	chr8:66948800-66954000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr8:66948800-66954200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr8:66949000-66949600	Enhancers	Dnd41	blood
16	chr8:66949000-66950400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr8:66949200-66949400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr8:66949200-66949800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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