Variant report

Variant rs4593336
Chromosome Location chr6:86181931-86181932
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:86171800-86185200 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr6:86171800-86186000 Weak transcription Fetal Stomach stomach
3 chr6:86171800-86187600 Weak transcription Colonic Mucosa Colon
4 chr6:86172200-86186000 Weak transcription Rectal Smooth Muscle rectum
5 chr6:86172400-86192800 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr6:86175600-86191800 Weak transcription Colon Smooth Muscle Colon
7 chr6:86176000-86183800 Genic enhancers NHDF-Ad bronchial
8 chr6:86176200-86183000 Weak transcription Primary T cells from cord blood blood
9 chr6:86176200-86187000 Strong transcription Liver Liver
10 chr6:86176200-86192400 Weak transcription A549 lung
11 chr6:86176200-86192600 Weak transcription HepG2 liver
12 chr6:86176600-86191400 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr6:86176800-86242600 Weak transcription Gastric stomach
14 chr6:86177600-86182200 Enhancers Placenta Placenta
15 chr6:86178000-86183800 Genic enhancers Osteobl bone
16 chr6:86178600-86182800 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr6:86178800-86184000 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
18 chr6:86178800-86206800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr6:86179200-86185600 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr6:86179400-86186000 Weak transcription Lung lung
21 chr6:86179600-86182400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr6:86180000-86182200 Strong transcription Muscle Satellite Cultured Cells --
23 chr6:86180000-86182600 Strong transcription HMEC breast
24 chr6:86180000-86182800 Weak transcription Ovary ovary
25 chr6:86180000-86191600 Strong transcription HSMM muscle
26 chr6:86180200-86182200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr6:86180200-86182600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr6:86180200-86182800 Weak transcription NHLF lung
29 chr6:86180200-86183000 Weak transcription HSMMtube muscle
30 chr6:86180400-86182800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr6:86180400-86185800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr6:86180600-86182600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr6:86181000-86182200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr6:86181000-86182200 Strong transcription Fetal Muscle Leg muscle
35 chr6:86181000-86184000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr6:86181000-86186800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr6:86181400-86182000 Strong transcription Fetal Muscle Trunk muscle
38 chr6:86181600-86182000 Strong transcription Stomach Smooth Muscle stomach
39 chr6:86181600-86182200 Enhancers Aorta Aorta
40 chr6:86181600-86183200 Strong transcription HUVEC blood vessel
41 chr6:86181600-86183800 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
42 chr6:86181600-86184200 Enhancers Hela-S3 cervix
43 chr6:86181800-86182600 Enhancers NH-A brain
44 chr6:86181800-86183400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
45 chr6:86181800-86183600 Genic enhancers NHEK skin

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