Variant report

Variant	rs4597804
Chromosome Location	chr4:47012459-47012460
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11737061	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11941209	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12108581	0.80[ASN][1000 genomes]
rs1512143	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1512144	0.90[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs4368579	0.88[ASN][1000 genomes]
rs45460902	0.82[ASN][1000 genomes]
rs4695187	0.84[EUR][1000 genomes]
rs55807334	0.95[ASN][1000 genomes]
rs56984276	0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs59535261	0.95[ASN][1000 genomes]
rs62303737	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:46997600-47013200	Weak transcription	Right Ventricle	heart
2	chr4:47011600-47013400	Enhancers	Stomach Mucosa	stomach
3	chr4:47011800-47012600	Enhancers	Primary T helper cells PMA-I stimulated	--
4	chr4:47011800-47012600	Enhancers	Primary T killer memory cells from peripheral blood	blood
5	chr4:47012000-47012600	Enhancers	Primary T helper naive cells from peripheral blood	blood
6	chr4:47012000-47012600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
7	chr4:47012000-47012800	Enhancers	Primary T helper cells fromperipheralblood	blood
8	chr4:47012200-47013600	Enhancers	Fetal Heart	heart
9	chr4:47012400-47012600	Enhancers	Dnd41	blood
10	chr4:47012400-47012600	Enhancers	Monocytes-CD14+_RO01746	blood
11	chr4:47012400-47012800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
12	chr4:47012400-47012800	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
13	chr4:47012400-47012800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
14	chr4:47012400-47012800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
15	chr4:47012400-47012800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
16	chr4:47012400-47012800	Enhancers	Colon Smooth Muscle	Colon
17	chr4:47012400-47012800	Enhancers	Duodenum Smooth Muscle	Duodenum
18	chr4:47012400-47013000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
19	chr4:47012400-47013600	Enhancers	GM12878-XiMat	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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