Variant report

Variant	rs12108581
Chromosome Location	chr4:47035426-47035427
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs11941209	0.80[ASN][1000 genomes]
rs12108590	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12108623	0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12651299	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2236781	0.97[AFR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs41309288	0.81[EUR][1000 genomes]
rs4368579	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4499677	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs45460902	0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4574382	0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4597804	0.80[ASN][1000 genomes]
rs55698013	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs55807334	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs55962021	0.90[ASN][1000 genomes]
rs56984276	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs58651337	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58832969	0.82[AFR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59535261	0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62303737	0.80[ASN][1000 genomes]
rs62305280	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62305286	0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6447526	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6447527	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6447528	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs66968475	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6828930	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6834421	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7356278	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7672943	0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7676327	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7682625	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7686328	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7699999	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9999804	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:47032800-47035800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
2	chr4:47032800-47036000	Active TSS	Brain Hippocampus Middle	brain
3	chr4:47032800-47036200	Active TSS	Brain Anterior Caudate	brain
4	chr4:47033000-47035800	Active TSS	Brain Angular Gyrus	brain
5	chr4:47033000-47036600	Active TSS	Brain Inferior Temporal Lobe	brain
6	chr4:47035200-47035600	Enhancers	Fetal Heart	heart
7	chr4:47035200-47036000	Active TSS	Brain Cingulate Gyrus	brain

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