Variant report

Variant	rs460439
Chromosome Location	chr21:39999894-39999895
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs118331	0.91[ASN][1000 genomes]
rs460049	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs462006	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs463166	0.85[ASN][1000 genomes]
rs463780	0.81[ASN][1000 genomes]
rs467138	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:39995200-40002400	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr21:39996600-40000600	Weak transcription	Aorta	Aorta
3	chr21:39996600-40001800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr21:39997600-40000000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr21:39999200-40000400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr21:39999400-40000200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links