Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:105128438..105130994-chr1:105132786..105134781,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10110968	0.84[EUR][1000 genomes]
rs12674701	0.83[EUR][1000 genomes]
rs4257990	0.84[EUR][1000 genomes]
rs4314633	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4317549	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4506195	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4527851	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4581036	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4590425	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6470241	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6984232	0.84[EUR][1000 genomes]
rs6985308	0.86[EUR][1000 genomes]
rs6993858	0.86[EUR][1000 genomes]
rs7002456	0.84[EUR][1000 genomes]
rs7010910	0.84[EUR][1000 genomes]
rs7386298	0.86[EUR][1000 genomes]
rs7387520	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7819902	0.84[EUR][1000 genomes]
rs7835851	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7841552	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1010903	chr1:104483363-105468941	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv2762170	chr1:104817700-105411596	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv872081	chr1:105009637-105455991	Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv1004836	chr1:105104358-105173095	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv999490	chr1:105105338-105173095	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv1013052	chr1:105105338-105175991	Enhancers ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv547218	chr1:105111443-105134662	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:105127800-105134800	Weak transcription	Primary B cells from peripheral blood	blood

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