Variant report

Variant	rs4655641
Chromosome Location	chr1:67089764-67089765
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	EP300	chr1:67089251-67090660	SK-N-SH	brain:	n/a	chr1:67089659-67089668 chr1:67090268-67090277
2	NFIC	chr1:67089343-67089929	SK-N-SH	brain:	n/a	chr1:67089600-67089617 chr1:67089600-67089616
3	GATA3	chr1:67089286-67091505	SK-N-SH	brain:	n/a	chr1:67090266-67090275 chr1:67089763-67089773 chr1:67089657-67089667 chr1:67089421-67089430 chr1:67090596-67090604
4	POLR2A	chr1:67089354-67089984	SK-N-SH	brain:	n/a	n/a
5	FOSL2	chr1:67089330-67090615	SK-N-SH	brain:	n/a	chr1:67090295-67090305 chr1:67090266-67090278 chr1:67090268-67090276 chr1:67090294-67090306 chr1:67090268-67090275 chr1:67090296-67090304 chr1:67090267-67090277 chr1:67090268-67090276 chr1:67090267-67090277
6	RXRA	chr1:67089342-67089837	SK-N-SH	brain:	n/a	n/a
7	TCF12	chr1:67089279-67090749	SK-N-SH	brain:	n/a	n/a
8	KAP1	chr1:67089361-67090411	U2OS	brain:	n/a	chr1:67089885-67089893
9	JUND	chr1:67089306-67090665	SK-N-SH	brain:	n/a	chr1:67090295-67090305 chr1:67090266-67090278 chr1:67090268-67090276 chr1:67090294-67090306 chr1:67090268-67090275 chr1:67090296-67090304 chr1:67090267-67090277 chr1:67090268-67090276 chr1:67090267-67090277
10	RAD21	chr1:67089446-67089888	SK-N-SH_RA	brain:	n/a	n/a
11	CTCF	chr1:67089720-67089870	HCPEpiC	choroid plexus:	n/a	n/a
12	KAP1	chr1:67089364-67089924	HEK293	kidney:	n/a	chr1:67089885-67089893
13	TEAD4	chr1:67089403-67089969	SK-N-SH	brain:	n/a	chr1:67089695-67089704
14	TCF12	chr1:67089226-67090747	SK-N-SH	brain:	n/a	n/a
15	EP300	chr1:67089336-67089946	SK-N-SH_RA	brain:	n/a	chr1:67089659-67089668
16	EP300	chr1:67089208-67091520	SK-N-SH	brain:	n/a	chr1:67089659-67089668 chr1:67090268-67090277
17	NFIC	chr1:67089282-67090645	SK-N-SH	brain:	n/a	chr1:67089600-67089617 chr1:67089600-67089616
18	MEF2A	chr1:67089334-67089931	SK-N-SH	brain:	n/a	n/a
19	PBX3	chr1:67089443-67090832	SK-N-SH	brain:	n/a	n/a
20	GATA3	chr1:67089308-67090684	SK-N-SH	brain:	n/a	chr1:67090266-67090275 chr1:67089763-67089773 chr1:67089657-67089667 chr1:67089421-67089430 chr1:67090596-67090604
21	EP300	chr1:67089377-67089932	SK-N-SH_RA	brain:	n/a	chr1:67089659-67089668
22	MAFK	chr1:67089680-67089864	IMR90	lung:	n/a	n/a
23	EP300	chr1:67089453-67090661	SK-N-SH	brain:	n/a	chr1:67089659-67089668 chr1:67090268-67090277
24	PBX3	chr1:67089470-67089967	SK-N-SH	brain:	n/a	n/a
25	ELF1	chr1:67089463-67090020	SK-N-SH	brain:	n/a	chr1:67089760-67089771 chr1:67089659-67089670
26	JUND	chr1:67089343-67090699	SK-N-SH	brain:	n/a	chr1:67090295-67090305 chr1:67090266-67090278 chr1:67090268-67090276 chr1:67090294-67090306 chr1:67090268-67090275 chr1:67090296-67090304 chr1:67090267-67090277 chr1:67090268-67090276 chr1:67090267-67090277

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:67088339..67090517-chr1:67091923..67094068,2	K562	blood:

Variant related genes	Relation type
MIR3117	TF binding region
SGIP1	TF binding region

Extended variants
information (count: 101 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:99)

rs_ID	r²[population]
rs10443224	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[TSI][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10493410	0.86[CHB][hapmap];0.91[JPT][hapmap];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11208905	0.89[MEX][hapmap]
rs11208909	0.91[CHB][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11208915	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11208920	0.91[CHB][hapmap];0.95[JPT][hapmap];0.95[ASN][1000 genomes]
rs11208923	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11208926	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11208931	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11208938	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11208941	1.00[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap]
rs1159851	0.91[CHB][hapmap];0.98[CHD][hapmap];0.87[GIH][hapmap];0.91[JPT][hapmap];0.94[MEX][hapmap];0.86[TSI][hapmap];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1159852	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11799970	0.91[CHB][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11806387	0.95[CHB][hapmap];0.86[JPT][hapmap];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12027701	0.88[CEU][hapmap];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12032485	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12032691	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12037314	0.90[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12039010	1.00[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap]
rs12040170	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12041078	0.95[CHB][hapmap];0.89[JPT][hapmap];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12044655	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12045543	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12048321	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12049347	0.91[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12116888	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12120279	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12121959	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12124690	0.83[EUR][1000 genomes]
rs12125455	0.91[CHB][hapmap];0.98[CHD][hapmap];0.87[GIH][hapmap];0.91[JPT][hapmap];0.94[MEX][hapmap];0.86[TSI][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12126819	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12127654	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12127884	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12128429	0.91[CHB][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12128496	0.91[CHB][hapmap];0.91[JPT][hapmap];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12129319	1.00[ASW][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];1.00[LWK][hapmap];0.86[MKK][hapmap];0.95[TSI][hapmap];0.91[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12131306	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.88[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12131909	0.91[CHB][hapmap];0.98[CHD][hapmap];0.87[GIH][hapmap];0.91[JPT][hapmap];0.94[MEX][hapmap];0.84[TSI][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12135689	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12139975	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12725322	0.91[CHB][hapmap];0.91[JPT][hapmap];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12726588	1.00[CEU][hapmap];0.91[CHB][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];0.85[MEX][hapmap];0.91[TSI][hapmap];0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12729740	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12731043	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12731104	0.91[CHB][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12731112	0.91[CHB][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12741427	0.81[JPT][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12746750	1.00[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap]
rs12750223	0.82[MEX][hapmap]
rs12751879	0.91[CHB][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1373910	0.95[CHB][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1536114	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1570814	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[GIH][hapmap];0.91[JPT][hapmap];0.89[MEX][hapmap];0.90[TSI][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17129098	0.90[YRI][hapmap]
rs17129280	1.00[CEU][hapmap];0.83[CHB][hapmap];0.87[JPT][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17129322	0.80[YRI][hapmap]
rs17129375	0.80[YRI][hapmap]
rs17129384	0.80[YRI][hapmap]
rs1900105	0.91[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1975523	0.91[CHB][hapmap];0.98[CHD][hapmap];0.87[GIH][hapmap];0.91[JPT][hapmap];0.94[MEX][hapmap];0.86[TSI][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1998717	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1998718	1.00[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2066006	0.89[YRI][hapmap]
rs2121041	0.91[CHB][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2218498	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2312154	0.91[CHB][hapmap];0.95[JPT][hapmap];0.95[ASN][1000 genomes]
rs34007277	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35156185	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs35902414	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs35939197	0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4233317	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4428858	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4462119	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4488004	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4655496	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4655497	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4655499	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4655500	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4655501	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4655502	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4655503	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4655619	0.95[CHB][hapmap];0.89[JPT][hapmap];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4655621	0.95[CHB][hapmap];0.91[JPT][hapmap];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4655622	0.91[CHB][hapmap];0.91[JPT][hapmap];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4655623	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4655624	0.91[CHB][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4655625	0.91[CHB][hapmap];0.98[CHD][hapmap];0.87[GIH][hapmap];0.91[JPT][hapmap];0.94[MEX][hapmap];0.86[TSI][hapmap];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4655626	0.81[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4655629	0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4655637	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4655644	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4655645	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4655649	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6679568	0.95[ASN][1000 genomes]
rs6696812	0.91[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs7528182	1.00[ASN][1000 genomes]
rs7546825	0.91[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs9787184	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1221	chr1:67047908-67092696	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv869413	chr1:67082512-67414286	Weak transcription Strong transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:67058000-67092200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr1:67071600-67094800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr1:67084200-67099800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr1:67087600-67090400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr1:67088400-67091000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr1:67088400-67114200	Weak transcription	Duodenum Smooth Muscle	Duodenum
7	chr1:67088800-67091200	Enhancers	NHDF-Ad	bronchial
8	chr1:67089000-67090000	Enhancers	HUVEC	blood vessel
9	chr1:67089200-67091200	Enhancers	Muscle Satellite Cultured Cells	--
10	chr1:67089200-67091200	Enhancers	Osteobl	bone
11	chr1:67089200-67091600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr1:67089400-67089800	Enhancers	Brain Inferior Temporal Lobe	brain
13	chr1:67089400-67090400	Enhancers	Fetal Heart	heart
14	chr1:67089400-67090800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr1:67089400-67090800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr1:67089400-67090800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr1:67089400-67090800	Enhancers	Brain Cingulate Gyrus	brain
18	chr1:67089400-67090800	Enhancers	HSMMtube	muscle
19	chr1:67089400-67091000	Enhancers	Brain Hippocampus Middle	brain
20	chr1:67089400-67091200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr1:67089400-67091200	Enhancers	Brain Substantia Nigra	brain
22	chr1:67089400-67091200	Enhancers	NHLF	lung
23	chr1:67089400-67091400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr1:67089400-67092000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr1:67089600-67090000	Enhancers	Hela-S3	cervix
26	chr1:67089600-67090000	Flanking Active TSS	NH-A	brain
27	chr1:67089600-67090600	Enhancers	HSMM	muscle
28	chr1:67089600-67090800	Enhancers	Brain Anterior Caudate	brain
29	chr1:67089600-67090800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
30	chr1:67089600-67090800	Enhancers	Pancreatic Islets	Pancreatic Islet
31	chr1:67089600-67091200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr1:67089600-67091200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr1:67089600-67091200	Enhancers	Brain Angular Gyrus	brain
34	chr1:67089600-67091200	Enhancers	HMEC	breast
35	chr1:67089600-67092200	Weak transcription	Aorta	Aorta

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links