The 2.0 version of rSNPBase

Variant report

Variant rs4656652
Chromosome Location chr1:169108819-169108820
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169091200-169124600 Weak transcription NHLF lung
2 chr1:169091600-169110000 Weak transcription Spleen Spleen
3 chr1:169091600-169120400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:169091600-169120600 Weak transcription Lung lung
5 chr1:169091800-169137600 Weak transcription Esophagus oesophagus
6 chr1:169095000-169112600 Weak transcription Stomach Mucosa stomach
7 chr1:169096600-169137400 Weak transcription Fetal Stomach stomach
8 chr1:169097000-169130000 Weak transcription Ovary ovary
9 chr1:169098800-169112200 Weak transcription HSMM muscle
10 chr1:169099400-169110400 Weak transcription Osteobl bone
11 chr1:169099400-169111200 Weak transcription Aorta Aorta
12 chr1:169099400-169112000 Weak transcription Psoas Muscle Psoas
13 chr1:169100800-169115000 Weak transcription Small Intestine intestine
14 chr1:169100800-169116200 Weak transcription Fetal Kidney kidney
15 chr1:169100800-169141400 Weak transcription Fetal Muscle Leg muscle
16 chr1:169101000-169113800 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr1:169101000-169137000 Weak transcription Primary T cells from cord blood blood
18 chr1:169101200-169113800 Weak transcription Brain Germinal Matrix brain
19 chr1:169102000-169117400 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr1:169102400-169120600 Weak transcription Left Ventricle heart
21 chr1:169102800-169112600 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr1:169102800-169114800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr1:169103200-169111200 Weak transcription Liver Liver
24 chr1:169103200-169116000 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr1:169103200-169116000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr1:169103200-169117200 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr1:169103200-169117400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:169103400-169109200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:169103400-169109800 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr1:169103400-169110600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:169103400-169110600 Weak transcription Duodenum Mucosa Duodenum
32 chr1:169103400-169130200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:169103600-169114000 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr1:169104000-169110400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:169104200-169117400 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr1:169104800-169120400 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr1:169104800-169142800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr1:169105600-169113800 Weak transcription Brain Hippocampus Middle brain
39 chr1:169108200-169109800 Enhancers HepG2 liver
40 chr1:169108600-169109000 Enhancers Fetal Intestine Small intestine
41 chr1:169108600-169109200 Enhancers Primary T regulatory cells fromperipheralblood blood
42 chr1:169108600-169109200 Genic enhancers A549 lung
43 chr1:169108800-169109200 Enhancers Fetal Heart heart
44 chr1:169108800-169110400 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015