The 2.0 version of rSNPBase

Variant report

Variant rs1419324
Chromosome Location chr1:169125759-169125760
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169091800-169137600 Weak transcription Esophagus oesophagus
2 chr1:169096600-169137400 Weak transcription Fetal Stomach stomach
3 chr1:169097000-169130000 Weak transcription Ovary ovary
4 chr1:169100800-169141400 Weak transcription Fetal Muscle Leg muscle
5 chr1:169101000-169137000 Weak transcription Primary T cells from cord blood blood
6 chr1:169103400-169130200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:169104800-169142800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr1:169115800-169130400 Weak transcription Brain Hippocampus Middle brain
9 chr1:169116200-169130200 Weak transcription Brain Anterior Caudate brain
10 chr1:169116400-169126600 Weak transcription Right Atrium heart
11 chr1:169116400-169139400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr1:169118000-169137000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr1:169118200-169130400 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr1:169118400-169126000 Weak transcription Stomach Mucosa stomach
15 chr1:169118400-169126400 Weak transcription Small Intestine intestine
16 chr1:169118600-169130000 Weak transcription Liver Liver
17 chr1:169120400-169130200 Weak transcription A549 lung
18 chr1:169121000-169129200 Weak transcription Lung lung
19 chr1:169121000-169137000 Weak transcription Psoas Muscle Psoas
20 chr1:169121000-169140800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:169121200-169141200 Weak transcription Left Ventricle heart
22 chr1:169121800-169143000 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr1:169122600-169130200 Weak transcription NHEK skin
24 chr1:169122800-169136400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr1:169124200-169127600 Enhancers Fetal Intestine Large intestine
26 chr1:169124400-169128000 Enhancers Fetal Intestine Small intestine
27 chr1:169124600-169130200 Weak transcription Stomach Smooth Muscle stomach
28 chr1:169124800-169130800 Weak transcription Gastric stomach
29 chr1:169124800-169138800 Weak transcription Primary B cells from cord blood blood
30 chr1:169125000-169126200 Weak transcription Duodenum Mucosa Duodenum
31 chr1:169125200-169126800 Enhancers Rectal Mucosa Donor 31 rectum
32 chr1:169125400-169126200 Weak transcription Fetal Heart heart
33 chr1:169125400-169130000 Weak transcription Colon Smooth Muscle Colon
34 chr1:169125400-169130200 Weak transcription Right Ventricle heart
35 chr1:169125400-169131200 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr1:169125600-169125800 Enhancers Colonic Mucosa Colon
37 chr1:169125600-169126600 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015