Variant report

Variant	rs4656667
Chromosome Location	chr1:169210519-169210520
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:169210444..169212042-chr1:169215118..169217438,2	K562	blood:
2	chr1:169210215..169210976-chr2:173891921..173892590,2	MCF-7	breast:

Extended variants
information (count: 230 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:197)

rs_ID	r²[population]
rs10800406	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10800407	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10800410	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10800411	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10800413	0.88[EUR][1000 genomes]
rs10800415	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10800417	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10800418	0.88[EUR][1000 genomes]
rs10800419	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10800420	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1080266	0.86[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs1080267	0.96[ASN][1000 genomes]
rs10919076	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10919082	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10919083	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10919084	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10919086	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10919090	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10919094	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10919095	0.83[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs10919099	0.88[EUR][1000 genomes]
rs10919101	0.88[EUR][1000 genomes]
rs10919106	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10919107	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10919108	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11802117	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11802143	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11808938	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11809256	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11810319	0.87[EUR][1000 genomes]
rs12057856	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12059281	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12065226	0.81[AFR][1000 genomes]
rs12065884	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12066375	0.83[AMR][1000 genomes]
rs12066426	0.96[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12067018	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12067072	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12071277	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12072226	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12072953	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12075832	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12076469	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12080100	0.88[EUR][1000 genomes]
rs12081283	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12082618	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12082810	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12083287	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12084549	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12084957	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12085114	0.86[AFR][1000 genomes]
rs12086292	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12086983	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12089118	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12092528	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12120493	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12121346	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12121395	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12123168	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12124144	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12124168	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12124744	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12125921	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12125985	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12126032	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12126266	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12127305	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12127613	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12129969	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12129979	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12130764	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12135928	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12140967	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12140995	0.88[EUR][1000 genomes]
rs12141151	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12141917	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12143131	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12143135	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12143965	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12144705	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12145939	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12145969	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12354315	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12562404	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12564596	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12568636	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12724093	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12724812	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12724863	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12734206	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12735503	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12736110	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12736723	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12739920	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12740040	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12741540	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12744184	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12744341	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12744655	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12745732	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12745997	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12747242	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12751062	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12755385	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12756799	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12758208	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1320965	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1320967	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1320968	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1358712	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1419323	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1419324	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1830492	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1830493	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1830494	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs1830495	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2012763	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2032044	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2050119	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2143287	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2179492	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2300159	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2420010	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2420012	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34250651	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs34599560	0.89[AFR][1000 genomes]
rs35631014	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs35774511	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs36079696	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3737681	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs3753297	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3753300	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3766053	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs3766054	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs3766055	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs3766059	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs3766060	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs3766061	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs3766062	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3766065	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3766066	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs3766067	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3766069	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3766070	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3766071	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3766077	0.88[EUR][1000 genomes]
rs3820053	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs3820055	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs3820056	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4140540	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4385775	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4445529	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4656181	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4656653	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4656654	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4656655	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4656656	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4656659	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4656660	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4656661	0.88[EUR][1000 genomes]
rs4656662	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4656665	0.88[EUR][1000 genomes]
rs4656666	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4656668	0.89[EUR][1000 genomes]
rs61806209	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61808871	0.89[EUR][1000 genomes]
rs61808872	0.88[EUR][1000 genomes]
rs61808874	0.82[EUR][1000 genomes]
rs6679084	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6688038	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6688139	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6695177	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6695252	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6701686	0.97[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs6703463	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6704482	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs67485965	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72700019	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs745922	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7518554	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7526721	0.83[AFR][1000 genomes]
rs7529937	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7541564	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7541675	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7541700	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7547686	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7552484	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs909929	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs909930	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs909931	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs932394	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs932395	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs958581	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9887854	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9887857	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9887903	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9887916	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:33 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3522071	chr1:168978325-169339044	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
2	esv3522072	chr1:168978325-169339044	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
3	esv10418	chr1:169059628-169621268	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
4	nsv429913	chr1:169177019-169296744	Weak transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	esv1834321	chr1:169180302-169240975	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	esv1845262	chr1:169180302-169240975	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	nsv1010010	chr1:169189586-169347545	Active TSS Weak transcription Flanking Active TSS Genic enhancers Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
8	nsv525520	chr1:169191860-169240084	Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Active TSS Strong transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
9	esv1845267	chr1:169191860-169240975	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
10	esv1849515	chr1:169191860-169240975	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	nsv872531	chr1:169191860-169388193	Active TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
12	nsv1012919	chr1:169200982-169324750	Flanking Active TSS Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
13	nsv1000254	chr1:169203554-169271792	Weak transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
14	esv1792529	chr1:169207360-169241309	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
15	esv1796180	chr1:169207360-169241309	Weak transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
16	esv1798593	chr1:169207360-169241309	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
17	esv1798636	chr1:169207360-169241309	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
18	esv1815887	chr1:169207360-169241309	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS Genic enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
19	esv1820986	chr1:169207360-169241309	Enhancers Genic enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
20	esv1826976	chr1:169207360-169241309	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Strong transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
21	esv1834829	chr1:169207360-169241309	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
22	esv1835188	chr1:169207360-169241309	Active TSS Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
23	esv1835323	chr1:169207360-169241309	Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
24	esv1837297	chr1:169207360-169241309	Weak transcription Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
25	esv1846574	chr1:169207360-169241309	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
26	esv1799599	chr1:169207360-169248783	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
27	esv1824460	chr1:169207360-169248783	ZNF genes & repeats Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
28	esv1825991	chr1:169207360-169248783	Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
29	esv1836551	chr1:169207360-169248783	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Genic enhancers Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
30	esv1837116	chr1:169207360-169248783	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
31	esv1847716	chr1:169207360-169248783	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
32	esv1847725	chr1:169207360-169248783	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
33	nsv1009170	chr1:169207940-169270995	Weak transcription ZNF genes & repeats Active TSS Enhancers Genic enhancers Flanking Active TSS Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs4656667	NME7	cis	Thyroid	GTEx
rs4656667	NME7	cis	Esophagus Muscularis	GTEx
rs4656667	NME7	Cis_1M	lymphoblastoid	RTeQTL
rs4656667	NME7	cis	Artery Tibial	GTEx

Chromatin state (count:39 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:169172600-169227000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr1:169187800-169211800	Weak transcription	Primary hematopoietic stem cells	blood
3	chr1:169194800-169214000	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr1:169199200-169211600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr1:169201000-169212800	Weak transcription	Psoas Muscle	Psoas
6	chr1:169208000-169214400	Weak transcription	Ovary	ovary
7	chr1:169208600-169210600	Enhancers	Fetal Heart	heart
8	chr1:169209600-169210600	Enhancers	Muscle Satellite Cultured Cells	--
9	chr1:169209600-169210600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr1:169209600-169210600	Enhancers	Colon Smooth Muscle	Colon
11	chr1:169209600-169210600	Enhancers	Hela-S3	cervix
12	chr1:169209600-169210800	Enhancers	NHEK	skin
13	chr1:169209800-169210600	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr1:169209800-169210600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr1:169209800-169210600	Enhancers	Brain Angular Gyrus	brain
16	chr1:169209800-169210600	Enhancers	HUVEC	blood vessel
17	chr1:169209800-169210600	Enhancers	NH-A	brain
18	chr1:169209800-169210800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr1:169209800-169210800	Enhancers	Liver	Liver
20	chr1:169210000-169210600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr1:169210000-169210600	Enhancers	HUES64 Cell Line	embryonic stem cell
22	chr1:169210000-169210600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr1:169210000-169210600	Enhancers	Brain Anterior Caudate	brain
24	chr1:169210000-169210600	Enhancers	Brain Hippocampus Middle	brain
25	chr1:169210000-169210600	Enhancers	Stomach Mucosa	stomach
26	chr1:169210200-169210600	Enhancers	H1 Cell Line	embryonic stem cell
27	chr1:169210200-169210600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr1:169210200-169210600	Enhancers	Brain Cingulate Gyrus	brain
29	chr1:169210200-169210600	Enhancers	Brain Inferior Temporal Lobe	brain
30	chr1:169210200-169210600	Enhancers	Brain Substantia Nigra	brain
31	chr1:169210200-169210600	Enhancers	Skeletal Muscle Female	skeletal muscle
32	chr1:169210200-169210800	Enhancers	Rectal Smooth Muscle	rectum
33	chr1:169210400-169210600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
34	chr1:169210400-169210600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr1:169210400-169210600	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr1:169210400-169210600	Enhancers	A549	lung
37	chr1:169210400-169210600	Enhancers	Osteobl	bone
38	chr1:169210400-169210800	Enhancers	NHDF-Ad	bronchial
39	chr1:169210400-169214400	Weak transcription	Pancreatic Islets	Pancreatic Islet

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