Variant report

Variant	rs11809256
Chromosome Location	chr1:169185614-169185615
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 202 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:196)

rs_ID	r²[population]
rs10800406	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10800407	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10800410	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10800411	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10800413	0.89[EUR][1000 genomes]
rs10800415	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10800417	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10800418	0.89[EUR][1000 genomes]
rs10800419	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10800420	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1080266	0.88[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs1080267	1.00[ASN][1000 genomes]
rs10919076	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10919082	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10919083	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10919084	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10919086	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10919090	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10919094	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10919095	0.85[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs10919099	0.89[EUR][1000 genomes]
rs10919101	0.89[EUR][1000 genomes]
rs10919106	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10919107	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10919108	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11802117	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11802143	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11808938	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11810319	0.88[EUR][1000 genomes]
rs12057856	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12059281	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12065884	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12066375	0.80[AMR][1000 genomes]
rs12066426	0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12067018	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12067072	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12071277	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12072226	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12072953	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12075832	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12076469	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12080100	0.89[EUR][1000 genomes]
rs12081283	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12082618	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12082810	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12083287	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12084549	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12084957	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12085114	0.84[AFR][1000 genomes]
rs12086292	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12086983	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12089118	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12092528	0.86[AMR][1000 genomes]
rs12120493	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12121346	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12121395	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12123168	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12124144	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12124168	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12124744	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12125921	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12125985	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12126032	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12126266	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12127305	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12127613	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12129969	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12129979	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12130764	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12135928	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12140967	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12140995	0.89[EUR][1000 genomes]
rs12141151	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12141917	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12143131	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12143135	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12143965	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12144705	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12145939	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12145969	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12354315	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12562404	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12564596	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12568636	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12724093	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12724812	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12724863	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12734206	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12735503	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12736110	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12736723	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12739920	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12740040	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12741540	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12744184	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12744341	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12744655	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12745732	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12745997	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12747242	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12751062	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12755385	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12756799	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12758208	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1320965	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1320967	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1320968	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1358712	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1419323	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1419324	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1830492	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1830493	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1830494	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1830495	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2012763	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2032044	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2050119	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2143287	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2179492	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2300159	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2420010	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2420012	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34250651	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs34599560	0.87[AFR][1000 genomes]
rs35631014	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs35774511	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs36079696	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3737681	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs3753297	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3753300	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3766053	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs3766054	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs3766055	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs3766059	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs3766060	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs3766061	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs3766062	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3766065	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3766066	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3766067	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3766069	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3766070	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3766071	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3766077	0.89[EUR][1000 genomes]
rs3820053	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs3820055	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs3820056	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4140540	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4385775	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4445529	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4656181	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4656653	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4656654	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4656655	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4656656	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4656659	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4656660	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4656661	0.89[EUR][1000 genomes]
rs4656662	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4656665	0.89[EUR][1000 genomes]
rs4656666	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4656667	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4656668	0.88[EUR][1000 genomes]
rs61806209	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs61808871	0.88[EUR][1000 genomes]
rs61808872	0.87[EUR][1000 genomes]
rs61808874	0.81[EUR][1000 genomes]
rs6679084	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6688038	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6688139	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6695177	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6695252	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6701686	0.95[AFR][1000 genomes];0.86[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs6703463	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6704482	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67485965	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72700019	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs745922	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7518554	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7526721	0.85[AFR][1000 genomes]
rs7529937	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7541564	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7541675	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7541700	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7547686	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7552484	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs909929	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs909930	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs909931	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs932394	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs932395	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs958581	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9887854	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9887857	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9887903	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9887916	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3522071	chr1:168978325-169339044	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
2	esv3522072	chr1:168978325-169339044	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
3	esv10418	chr1:169059628-169621268	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
4	nsv429913	chr1:169177019-169296744	Weak transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	esv1834321	chr1:169180302-169240975	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	esv1845262	chr1:169180302-169240975	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs11809256	NME7	cis	Esophagus Muscularis	GTEx
rs11809256	NME7	cis	Artery Tibial	GTEx
rs11809256	NME7	cis	Thyroid	GTEx
rs11809256	NME7	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:169130400-169195200	Weak transcription	Pancreas	Pancrea
2	chr1:169167800-169186800	Weak transcription	Primary T cells from cord blood	blood
3	chr1:169172400-169207600	Weak transcription	Esophagus	oesophagus
4	chr1:169172600-169227000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr1:169173200-169202000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr1:169176600-169206200	Weak transcription	Aorta	Aorta
7	chr1:169177400-169207400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr1:169178600-169191400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr1:169180000-169210000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr1:169180600-169206200	Weak transcription	Left Ventricle	heart
11	chr1:169182000-169201000	Weak transcription	Cortex derived primary cultured neurospheres	brain
12	chr1:169182800-169192000	Weak transcription	Small Intestine	intestine
13	chr1:169182800-169205400	Weak transcription	Adipose Nuclei	Adipose
14	chr1:169183600-169187200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
15	chr1:169184000-169198800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr1:169184400-169206200	Weak transcription	Lung	lung
17	chr1:169184600-169185800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
18	chr1:169184600-169186000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
19	chr1:169184600-169189200	Weak transcription	Brain Germinal Matrix	brain
20	chr1:169184600-169200600	Weak transcription	Fetal Stomach	stomach
21	chr1:169184800-169186400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr1:169184800-169187400	Weak transcription	Primary hematopoietic stem cells	blood
23	chr1:169184800-169207400	Weak transcription	Ovary	ovary
24	chr1:169185000-169185800	Enhancers	iPS-18 Cell Line	embryonic stem cell
25	chr1:169185000-169186000	Enhancers	ES-I3 Cell Line	embryonic stem cell
26	chr1:169185000-169186400	Enhancers	iPS-15b Cell Line	embryonic stem cell
27	chr1:169185000-169200800	Weak transcription	Fetal Intestine Small	intestine
28	chr1:169185200-169186000	Enhancers	iPS-20b Cell Line	embryonic stem cell
29	chr1:169185400-169185800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
30	chr1:169185400-169185800	ZNF genes & repeats	Primary B cells from cord blood	blood
31	chr1:169185400-169186000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
32	chr1:169185400-169186000	Enhancers	H9 Cell Line	embryonic stem cell
33	chr1:169185400-169186000	Enhancers	HUES64 Cell Line	embryonic stem cell
34	chr1:169185400-169186200	Enhancers	HUES48 Cell Line	embryonic stem cell
35	chr1:169185600-169185800	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
36	chr1:169185600-169186200	Enhancers	HUES6 Cell Line	embryonic stem cell

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