The 2.0 version of rSNPBase

Variant report

Variant rs12066676
Chromosome Location chr1:169095382-169095383
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169079800-169105800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr1:169081000-169098200 Weak transcription Small Intestine intestine
3 chr1:169082200-169097600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:169082400-169097400 Weak transcription Fetal Thymus thymus
5 chr1:169084200-169099200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr1:169085400-169097600 Weak transcription Fetal Brain Male brain
7 chr1:169085400-169102200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:169085600-169096600 Strong transcription Primary hematopoietic stem cells short term culture blood
9 chr1:169085800-169097400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr1:169085800-169100000 Weak transcription Thymus Thymus
11 chr1:169086200-169102000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr1:169086200-169102000 Weak transcription GM12878-XiMat blood
13 chr1:169086200-169102400 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr1:169086400-169100200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr1:169086600-169095400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr1:169086600-169103200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:169086600-169103400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr1:169089200-169096600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:169089600-169101600 Genic enhancers A549 lung
20 chr1:169089600-169103400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr1:169089800-169096200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:169090000-169098200 Weak transcription NHDF-Ad bronchial
23 chr1:169090000-169098400 Weak transcription HSMMtube muscle
24 chr1:169090000-169103800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr1:169090400-169103200 Strong transcription Sigmoid Colon Sigmoid Colon
26 chr1:169090600-169098400 Strong transcription HSMM muscle
27 chr1:169091000-169102200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:169091000-169102200 Strong transcription HepG2 liver
29 chr1:169091000-169102800 Strong transcription Hela-S3 cervix
30 chr1:169091200-169124600 Weak transcription NHLF lung
31 chr1:169091400-169098400 Weak transcription Aorta Aorta
32 chr1:169091400-169102200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:169091400-169103200 Strong transcription Liver Liver
34 chr1:169091400-169103400 Strong transcription Duodenum Mucosa Duodenum
35 chr1:169091600-169097800 Weak transcription Psoas Muscle Psoas
36 chr1:169091600-169101200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr1:169091600-169102000 Weak transcription Pancreas Pancrea
38 chr1:169091600-169110000 Weak transcription Spleen Spleen
39 chr1:169091600-169120400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr1:169091600-169120600 Weak transcription Lung lung
41 chr1:169091800-169104200 Strong transcription Rectal Mucosa Donor 31 rectum
42 chr1:169091800-169137600 Weak transcription Esophagus oesophagus
43 chr1:169092200-169098400 Strong transcription HMEC breast
44 chr1:169092200-169102400 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr1:169092400-169096200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr1:169092400-169106200 Weak transcription Gastric stomach
47 chr1:169092600-169103600 Strong transcription Rectal Mucosa Donor 29 rectum
48 chr1:169092800-169098400 Strong transcription Left Ventricle heart
49 chr1:169093200-169097200 Strong transcription NH-A brain
50 chr1:169093200-169100800 Strong transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015