Variant report
Variant | rs4668526 |
---|---|
Chromosome Location | chr2:7336837-7336838 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr2:7334770..7337311-chr2:7337607..7339692,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1016515 | 0.83[ASN][1000 genomes] |
rs11676725 | 0.85[ASN][1000 genomes] |
rs11680346 | 0.87[ASN][1000 genomes] |
rs11695715 | 0.84[ASN][1000 genomes] |
rs12612703 | 0.84[ASN][1000 genomes] |
rs12621585 | 0.84[ASN][1000 genomes] |
rs12623613 | 0.84[ASN][1000 genomes] |
rs13002545 | 0.84[ASN][1000 genomes] |
rs13007890 | 0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs13023691 | 0.84[ASN][1000 genomes] |
rs13035063 | 0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1404841 | 0.99[ASN][1000 genomes] |
rs1404842 | 0.98[ASN][1000 genomes] |
rs1404843 | 0.99[ASN][1000 genomes] |
rs1404844 | 0.99[ASN][1000 genomes] |
rs1464879 | 0.85[ASN][1000 genomes] |
rs1464880 | 0.91[JPT][hapmap] |
rs1473656 | 0.88[ASN][1000 genomes] |
rs1474401 | 0.99[ASN][1000 genomes] |
rs1474402 | 0.99[ASN][1000 genomes] |
rs1474403 | 0.99[ASN][1000 genomes] |
rs1525491 | 0.85[ASN][1000 genomes] |
rs1581562 | 0.85[ASN][1000 genomes] |
rs17672986 | 1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1880604 | 1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1917675 | 0.85[ASN][1000 genomes] |
rs1917676 | 0.85[ASN][1000 genomes] |
rs1917677 | 0.85[ASN][1000 genomes] |
rs1917680 | 1.00[ASN][1000 genomes] |
rs2352711 | 0.99[ASN][1000 genomes] |
rs2352713 | 0.83[ASN][1000 genomes] |
rs34130652 | 0.84[ASN][1000 genomes] |
rs36034588 | 0.85[ASN][1000 genomes] |
rs4356635 | 0.85[ASN][1000 genomes] |
rs4362529 | 0.85[ASN][1000 genomes] |
rs4362530 | 0.85[ASN][1000 genomes] |
rs4668527 | 0.87[ASN][1000 genomes] |
rs4669146 | 0.81[AFR][1000 genomes] |
rs4669147 | 0.99[ASN][1000 genomes] |
rs4669148 | 0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4669149 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4669150 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4669154 | 0.91[ASN][1000 genomes] |
rs4669155 | 0.91[ASN][1000 genomes] |
rs4669157 | 0.89[ASN][1000 genomes] |
rs4669162 | 0.85[ASN][1000 genomes] |
rs4669163 | 0.87[ASN][1000 genomes] |
rs55914055 | 0.86[ASN][1000 genomes] |
rs6719090 | 0.99[ASN][1000 genomes] |
rs6732488 | 0.83[ASN][1000 genomes] |
rs6738582 | 0.81[ASN][1000 genomes] |
rs6739202 | 0.85[ASN][1000 genomes] |
rs6744969 | 0.99[ASN][1000 genomes] |
rs6745122 | 0.99[ASN][1000 genomes] |
rs7557233 | 0.99[ASN][1000 genomes] |
rs7559257 | 0.90[JPT][hapmap] |
rs7607300 | 0.99[ASN][1000 genomes] |
rs870863 | 0.85[ASN][1000 genomes] |
rs960793 | 0.85[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv915888 | chr2:7197783-7461967 | Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:7331000-7341800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |