The 2.0 version of rSNPBase

Variant report

Variant rs4673396
Chromosome Location chr2:209178451-209178452
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:209139400-209180000 Strong transcription Fetal Thymus thymus
2 chr2:209141200-209180000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr2:209147400-209225600 Weak transcription Stomach Mucosa stomach
4 chr2:209149600-209179800 Strong transcription Dnd41 blood
5 chr2:209156000-209180000 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr2:209159200-209182200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr2:209159800-209179400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr2:209160000-209188800 Weak transcription Small Intestine intestine
9 chr2:209163000-209187400 Strong transcription Primary monocytes fromperipheralblood blood
10 chr2:209163200-209180600 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr2:209163200-209187400 Strong transcription Primary T cells fromperipheralblood blood
12 chr2:209163400-209180600 Strong transcription Primary hematopoietic stem cells short term culture blood
13 chr2:209163400-209187400 Strong transcription Primary neutrophils fromperipheralblood blood
14 chr2:209163600-209180600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr2:209163600-209182200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr2:209164800-209179400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr2:209165800-209180000 Weak transcription Aorta Aorta
18 chr2:209165800-209204000 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr2:209166200-209189600 Weak transcription Pancreas Pancrea
20 chr2:209166600-209189000 Weak transcription Placenta Amnion Placenta Amnion
21 chr2:209167000-209179600 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr2:209167200-209179600 Weak transcription NHEK skin
23 chr2:209169800-209180000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr2:209170000-209179000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr2:209170000-209179000 Weak transcription Lung lung
26 chr2:209170000-209179000 Weak transcription Thymus Thymus
27 chr2:209170000-209179200 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr2:209170000-209179200 Weak transcription A549 lung
29 chr2:209170000-209179400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr2:209170000-209179400 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr2:209170000-209179400 Weak transcription Gastric stomach
32 chr2:209170000-209179600 Weak transcription H9 Cell Line embryonic stem cell
33 chr2:209170000-209179600 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr2:209170000-209179800 Weak transcription Fetal Brain Male brain
35 chr2:209170000-209179800 Weak transcription Ovary ovary
36 chr2:209170000-209179800 Weak transcription Rectal Smooth Muscle rectum
37 chr2:209170000-209179800 Weak transcription Hela-S3 cervix
38 chr2:209170000-209180000 Weak transcription Esophagus oesophagus
39 chr2:209170000-209182200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr2:209170000-209182200 Weak transcription Spleen Spleen
41 chr2:209170000-209183000 Weak transcription Psoas Muscle Psoas
42 chr2:209170000-209190000 Weak transcription Right Ventricle heart
43 chr2:209170200-209178800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr2:209170200-209179000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr2:209170200-209179000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr2:209170200-209179000 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr2:209170200-209179200 Weak transcription Brain Hippocampus Middle brain
48 chr2:209170200-209179400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr2:209170200-209179600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr2:209170200-209179600 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015