The 2.0 version of rSNPBase

Variant report

Variant rs6709286
Chromosome Location chr2:209180651-209180652
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:209147400-209225600 Weak transcription Stomach Mucosa stomach
2 chr2:209159200-209182200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr2:209160000-209188800 Weak transcription Small Intestine intestine
4 chr2:209163000-209187400 Strong transcription Primary monocytes fromperipheralblood blood
5 chr2:209163200-209187400 Strong transcription Primary T cells fromperipheralblood blood
6 chr2:209163400-209187400 Strong transcription Primary neutrophils fromperipheralblood blood
7 chr2:209163600-209182200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr2:209165800-209204000 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr2:209166200-209189600 Weak transcription Pancreas Pancrea
10 chr2:209166600-209189000 Weak transcription Placenta Amnion Placenta Amnion
11 chr2:209170000-209182200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr2:209170000-209182200 Weak transcription Spleen Spleen
13 chr2:209170000-209183000 Weak transcription Psoas Muscle Psoas
14 chr2:209170000-209190000 Weak transcription Right Ventricle heart
15 chr2:209170200-209189600 Weak transcription Colonic Mucosa Colon
16 chr2:209171400-209184000 Weak transcription HUVEC blood vessel
17 chr2:209174000-209187400 Strong transcription HUES64 Cell Line embryonic stem cell
18 chr2:209176800-209184000 Strong transcription Adipose Nuclei Adipose
19 chr2:209177200-209182200 Weak transcription Muscle Satellite Cultured Cells --
20 chr2:209177800-209182600 Weak transcription Fetal Heart heart
21 chr2:209178800-209180800 Strong transcription Fetal Lung lung
22 chr2:209178800-209183200 Strong transcription Colon Smooth Muscle Colon
23 chr2:209178800-209187400 Strong transcription Primary T helper cells PMA-I stimulated --
24 chr2:209179000-209180800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr2:209179000-209180800 Strong transcription iPS-18 Cell Line embryonic stem cell
26 chr2:209179000-209181200 Strong transcription Primary T helper cells fromperipheralblood blood
27 chr2:209179000-209183000 Strong transcription Cortex derived primary cultured neurospheres brain
28 chr2:209179000-209183400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr2:209179000-209184400 Strong transcription Fetal Muscle Trunk muscle
30 chr2:209179000-209185800 Strong transcription Fetal Intestine Large intestine
31 chr2:209179000-209190600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr2:209179000-209220600 Strong transcription Primary T regulatory cells fromperipheralblood blood
33 chr2:209179200-209180800 Strong transcription Brain Hippocampus Middle brain
34 chr2:209179600-209180800 Strong transcription H9 Cell Line embryonic stem cell
35 chr2:209179600-209184000 Strong transcription Brain Germinal Matrix brain
36 chr2:209179600-209186200 Strong transcription Placenta Placenta
37 chr2:209180000-209183000 Strong transcription Brain Angular Gyrus brain
38 chr2:209180200-209182200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr2:209180400-209182000 Weak transcription Fetal Brain Female brain
40 chr2:209180400-209182200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr2:209180400-209182200 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr2:209180400-209182200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr2:209180400-209182200 Weak transcription Gastric stomach
44 chr2:209180400-209182200 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr2:209180400-209182200 Weak transcription HepG2 liver
46 chr2:209180400-209182400 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr2:209180400-209182600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr2:209180400-209182600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr2:209180400-209182600 Weak transcription Brain Inferior Temporal Lobe brain
50 chr2:209180400-209182600 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015