Variant report

Variant	rs4683562
Chromosome Location	chr3:140838459-140838460
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs12631984	0.92[ASN][1000 genomes]
rs1426956	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16851064	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16851066	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4683555	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73871713	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73872041	0.93[ASN][1000 genomes]
rs73872044	0.93[ASN][1000 genomes]
rs73872048	0.93[ASN][1000 genomes]
rs73872053	0.88[ASN][1000 genomes]
rs73872056	0.93[ASN][1000 genomes]
rs7433008	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs922475	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs922476	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:140823800-140846800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr3:140829400-140841400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr3:140832400-140840400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr3:140832400-140845200	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr3:140834200-140842400	Weak transcription	Right Ventricle	heart
6	chr3:140835200-140841400	Weak transcription	Pancreas	Pancrea
7	chr3:140835400-140841200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr3:140835400-140841400	Weak transcription	Left Ventricle	heart
9	chr3:140835400-140841600	Weak transcription	Right Atrium	heart
10	chr3:140835800-140840400	Weak transcription	Fetal Heart	heart
11	chr3:140836000-140841200	Weak transcription	Fetal Stomach	stomach
12	chr3:140836200-140841400	Weak transcription	Fetal Muscle Leg	muscle
13	chr3:140836400-140841000	Weak transcription	Fetal Thymus	thymus
14	chr3:140837200-140840000	Weak transcription	Dnd41	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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