Variant report

Variant rs4687753
Chromosome Location chr3:53895461-53895462
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:53881200-53895800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr3:53884000-53895800 Strong transcription HepG2 liver
3 chr3:53885000-53901000 Weak transcription Fetal Heart heart
4 chr3:53885600-53896600 Weak transcription Right Ventricle heart
5 chr3:53886200-53897200 Weak transcription Colonic Mucosa Colon
6 chr3:53887800-53898400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr3:53888400-53914600 Weak transcription Stomach Mucosa stomach
8 chr3:53889000-53901400 Weak transcription Esophagus oesophagus
9 chr3:53889600-53896000 Strong transcription Pancreas Pancrea
10 chr3:53889600-53913800 Strong transcription Breast Myoepithelial Primary Cells Breast
11 chr3:53890000-53895800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr3:53890000-53904000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr3:53890200-53895800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr3:53890400-53898600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr3:53890400-53898800 Weak transcription NH-A brain
16 chr3:53890400-53903600 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr3:53890800-53914600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr3:53891000-53895800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr3:53891000-53898000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr3:53891000-53898000 Weak transcription Spleen Spleen
21 chr3:53891000-53914200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr3:53891000-53914200 Strong transcription Duodenum Mucosa Duodenum
23 chr3:53891200-53897800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr3:53891200-53898600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr3:53891200-53900800 Weak transcription Colon Smooth Muscle Colon
26 chr3:53891200-53910800 Strong transcription Fetal Stomach stomach
27 chr3:53891400-53898400 Weak transcription Small Intestine intestine
28 chr3:53891400-53914200 Strong transcription HUES64 Cell Line embryonic stem cell
29 chr3:53891600-53897800 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr3:53891600-53904000 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr3:53891800-53912800 Strong transcription Brain Germinal Matrix brain
32 chr3:53892000-53914400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr3:53892200-53897000 Strong transcription Fetal Intestine Large intestine
34 chr3:53892200-53912400 Strong transcription Fetal Brain Female brain
35 chr3:53892200-53914000 Strong transcription Adipose Nuclei Adipose
36 chr3:53892200-53914400 Strong transcription HUES48 Cell Line embryonic stem cell
37 chr3:53892200-53914600 Strong transcription HUES6 Cell Line embryonic stem cell
38 chr3:53892400-53899400 Strong transcription H1 Cell Line embryonic stem cell
39 chr3:53892400-53904800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr3:53892400-53906200 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr3:53892400-53913000 Strong transcription Cortex derived primary cultured neurospheres brain
42 chr3:53892400-53913800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr3:53892400-53914200 Strong transcription Stomach Smooth Muscle stomach
44 chr3:53892400-53914400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr3:53892600-53896400 Weak transcription HUVEC blood vessel
46 chr3:53892600-53914200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr3:53892600-53914400 Strong transcription iPS-18 Cell Line embryonic stem cell
48 chr3:53892600-53914400 Strong transcription Fetal Muscle Leg muscle
49 chr3:53892800-53895800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr3:53892800-53895800 Weak transcription Fetal Kidney kidney

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