Variant report

Variant rs9860367
Chromosome Location chr3:53897929-53897930
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:53885000-53901000 Weak transcription Fetal Heart heart
2 chr3:53887800-53898400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr3:53888400-53914600 Weak transcription Stomach Mucosa stomach
4 chr3:53889000-53901400 Weak transcription Esophagus oesophagus
5 chr3:53889600-53913800 Strong transcription Breast Myoepithelial Primary Cells Breast
6 chr3:53890000-53904000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr3:53890400-53898600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr3:53890400-53898800 Weak transcription NH-A brain
9 chr3:53890400-53903600 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr3:53890800-53914600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr3:53891000-53898000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr3:53891000-53898000 Weak transcription Spleen Spleen
13 chr3:53891000-53914200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr3:53891000-53914200 Strong transcription Duodenum Mucosa Duodenum
15 chr3:53891200-53898600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr3:53891200-53900800 Weak transcription Colon Smooth Muscle Colon
17 chr3:53891200-53910800 Strong transcription Fetal Stomach stomach
18 chr3:53891400-53898400 Weak transcription Small Intestine intestine
19 chr3:53891400-53914200 Strong transcription HUES64 Cell Line embryonic stem cell
20 chr3:53891600-53904000 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr3:53891800-53912800 Strong transcription Brain Germinal Matrix brain
22 chr3:53892000-53914400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr3:53892200-53912400 Strong transcription Fetal Brain Female brain
24 chr3:53892200-53914000 Strong transcription Adipose Nuclei Adipose
25 chr3:53892200-53914400 Strong transcription HUES48 Cell Line embryonic stem cell
26 chr3:53892200-53914600 Strong transcription HUES6 Cell Line embryonic stem cell
27 chr3:53892400-53899400 Strong transcription H1 Cell Line embryonic stem cell
28 chr3:53892400-53904800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr3:53892400-53906200 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr3:53892400-53913000 Strong transcription Cortex derived primary cultured neurospheres brain
31 chr3:53892400-53913800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr3:53892400-53914200 Strong transcription Stomach Smooth Muscle stomach
33 chr3:53892400-53914400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr3:53892600-53914200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr3:53892600-53914400 Strong transcription iPS-18 Cell Line embryonic stem cell
36 chr3:53892600-53914400 Strong transcription Fetal Muscle Leg muscle
37 chr3:53892800-53914200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr3:53892800-53914200 Strong transcription Fetal Muscle Trunk muscle
39 chr3:53892800-53914200 Strong transcription Thymus Thymus
40 chr3:53892800-53914400 Strong transcription iPS-20b Cell Line embryonic stem cell
41 chr3:53892800-53914600 Strong transcription Monocytes-CD14+_RO01746 blood
42 chr3:53893000-53914000 Strong transcription Placenta Placenta
43 chr3:53893000-53914400 Strong transcription Fetal Adrenal Gland Adrenal Gland
44 chr3:53893200-53914000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr3:53893200-53914200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr3:53893200-53914200 Strong transcription Primary neutrophils fromperipheralblood blood
47 chr3:53893200-53914200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr3:53893200-53914600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr3:53893400-53898400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr3:53893400-53902600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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