Variant report

Variant	rs4692542
Chromosome Location	chr4:26534044-26534045
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs13135516	0.82[EUR][1000 genomes]
rs1387542	0.97[EUR][1000 genomes]
rs1565296	0.81[EUR][1000 genomes]
rs1565297	0.82[EUR][1000 genomes]
rs1976170	0.82[EUR][1000 genomes]
rs2200840	0.84[EUR][1000 genomes]
rs28368470	0.81[AFR][1000 genomes]
rs28769578	0.82[AFR][1000 genomes]
rs28810168	0.82[AFR][1000 genomes]
rs4692540	0.83[EUR][1000 genomes]
rs73247935	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762417	chr4:26491768-26576800	Enhancers Weak transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26531000-26535400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
2	chr4:26532200-26536600	Weak transcription	HSMMtube	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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