Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:22028111..22029824-chr4:22035660..22037244,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10433826	0.87[EUR][1000 genomes]
rs12501816	0.86[EUR][1000 genomes]
rs13108588	0.92[EUR][1000 genomes]
rs13132801	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1513563	0.83[YRI][hapmap]
rs1513574	0.91[EUR][1000 genomes]
rs17526294	0.86[EUR][1000 genomes]
rs2015779	0.94[EUR][1000 genomes]
rs34196510	0.94[EUR][1000 genomes]
rs34512134	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34843622	0.94[EUR][1000 genomes]
rs34927464	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4697263	0.86[EUR][1000 genomes]
rs67235125	0.86[EUR][1000 genomes]
rs68147450	0.83[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs6833673	0.94[EUR][1000 genomes]
rs6834048	0.84[AFR][1000 genomes]
rs6839252	0.94[EUR][1000 genomes]
rs7659568	0.94[EUR][1000 genomes]
rs925570	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817467	chr4:21602921-22422816	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv432584	chr4:22009677-22080362	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	esv2757925	chr4:22011581-22230718	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv2759232	chr4:22011581-22230718	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	esv2757043	chr4:22017167-22090982	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
6	nsv432585	chr4:22017218-22070731	Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
7	nsv435775	chr4:22026385-22032731	Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:22028800-22029000	ZNF genes & repeats	H9 Cell Line	embryonic stem cell

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