Variant report

Variant	rs4706932
Chromosome Location	chr6:82809754-82809755
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10943857	0.87[EUR][1000 genomes]
rs1361094	0.81[EUR][1000 genomes]
rs1538138	0.87[EUR][1000 genomes]
rs2027245	0.80[EUR][1000 genomes]
rs6454251	0.90[EUR][1000 genomes]
rs6454253	0.93[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs6454254	0.83[EUR][1000 genomes]
rs6910919	0.89[EUR][1000 genomes]
rs7754927	0.83[EUR][1000 genomes]
rs7773801	0.87[EUR][1000 genomes]
rs9294244	0.91[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs9353050	0.89[EUR][1000 genomes]
rs9443955	0.83[EUR][1000 genomes]
rs9986372	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021464	chr6:82738920-82876526	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv830713	chr6:82761201-82953570	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
3	nsv830715	chr6:82806657-82956327	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82809400-82810000	Weak transcription	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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