Variant report

Variant	rs4715171
Chromosome Location	chr6:50062674-50062675
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1033883	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1324517	0.97[AFR][1000 genomes]
rs1324519	1.00[AMR][1000 genomes]
rs642141	0.84[AFR][1000 genomes]
rs679989	0.84[AFR][1000 genomes]
rs6933906	0.90[ASW][hapmap];0.95[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs694258	0.90[YRI][hapmap];0.87[AFR][1000 genomes]
rs7758921	1.00[AFR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:50060000-50066000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr6:50060800-50064400	Enhancers	Fetal Lung	lung
3	chr6:50061200-50064400	Weak transcription	Fetal Brain Male	brain
4	chr6:50061600-50063800	Active TSS	Liver	Liver
5	chr6:50062000-50063000	Weak transcription	Fetal Brain Female	brain
6	chr6:50062000-50064200	Weak transcription	Fetal Intestine Large	intestine
7	chr6:50062400-50064800	Enhancers	Fetal Intestine Small	intestine
8	chr6:50062600-50065000	Enhancers	Duodenum Smooth Muscle	Duodenum
9	chr6:50062600-50065000	Enhancers	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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