Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs12666343	0.84[ASN][1000 genomes]
rs12698625	1.00[ASN][1000 genomes]
rs13238059	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13242525	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13244158	0.86[ASN][1000 genomes]
rs2864463	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2902759	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2902836	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34752925	0.81[ASN][1000 genomes]
rs35227483	0.88[ASN][1000 genomes]
rs35712623	0.86[ASN][1000 genomes]
rs35746743	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35850158	0.91[ASN][1000 genomes]
rs3846975	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4718638	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62458311	1.00[ASN][1000 genomes]
rs62458316	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6946477	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6951285	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6955469	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6955571	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6973904	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6975069	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71535653	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71535654	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1027532	chr7:67261526-67387398	Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:67319800-67323800	Weak transcription	Brain Germinal Matrix	brain
2	chr7:67320000-67323800	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr7:67320200-67323600	Weak transcription	Fetal Brain Female	brain
4	chr7:67320200-67323800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr7:67321000-67321400	Enhancers	HUES48 Cell Line	embryonic stem cell

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