Variant report

Variant	rs4726887
Chromosome Location	chr7:147264822-147264823
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10215839	1.00[CEU][hapmap]
rs10230213	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs10952701	1.00[CEU][hapmap]
rs11772061	0.88[YRI][hapmap];0.83[AFR][1000 genomes]
rs17170610	1.00[CEU][hapmap];0.82[YRI][hapmap];0.89[EUR][1000 genomes]
rs28522874	0.89[EUR][1000 genomes]
rs28726668	0.89[EUR][1000 genomes]
rs61581405	0.89[EUR][1000 genomes]
rs6964948	1.00[CEU][hapmap]
rs73461168	0.86[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs73462989	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73464972	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73464975	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73464989	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7791214	1.00[CEU][hapmap];0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147262200-147269000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr7:147262800-147267800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr7:147264200-147266000	Weak transcription	Fetal Kidney	kidney
4	chr7:147264600-147268600	Weak transcription	HUES64 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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