Variant report
| Variant | rs6964948 |
|---|---|
| Chromosome Location | chr7:147244098-147244099 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
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| No data |
| No data |
| No data |
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rSNPs within LD-proxies of this variant (count:13)
| rs_ID | r2[population] |
|---|---|
| rs10215839 | 1.00[CEU][hapmap];1.00[TSI][hapmap] |
| rs10230213 | 1.00[CEU][hapmap];1.00[TSI][hapmap] |
| rs10952701 | 1.00[CEU][hapmap] |
| rs11772061 | 0.90[EUR][1000 genomes] |
| rs17170577 | 1.00[TSI][hapmap] |
| rs17170610 | 1.00[CEU][hapmap] |
| rs4726887 | 1.00[CEU][hapmap];0.89[EUR][1000 genomes] |
| rs73461168 | 1.00[EUR][1000 genomes] |
| rs73462989 | 1.00[EUR][1000 genomes] |
| rs73464972 | 0.89[EUR][1000 genomes] |
| rs73464975 | 0.89[EUR][1000 genomes] |
| rs73464989 | 0.89[EUR][1000 genomes] |
| rs7791214 | 1.00[CEU][hapmap] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
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| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv931005 | chr7:146730472-147381257 | Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 7 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
