Variant report

Variant	rs4731041
Chromosome Location	chr7:121486702-121486703
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10225335	0.81[EUR][1000 genomes]
rs10230347	0.88[JPT][hapmap]
rs10261190	0.81[EUR][1000 genomes]
rs10264053	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10264157	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10278543	0.82[EUR][1000 genomes]
rs10279662	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10488055	0.81[EUR][1000 genomes]
rs13230741	0.82[EUR][1000 genomes]
rs2402593	0.94[JPT][hapmap]
rs28379507	0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4731039	0.81[EUR][1000 genomes]
rs4731040	0.81[EUR][1000 genomes]
rs7776594	0.81[ASN][1000 genomes]
rs9655836	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429808	chr7:121384049-121600049	Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv824292	chr7:121485473-121494375	Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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