Variant report

Variant	rs4731633
Chromosome Location	chr7:129459511-129459512
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:129408866..129410781-chr7:129457932..129460348,2	K562	blood:
2	chr7:129443362..129446037-chr7:129458801..129461329,2	K562	blood:

Variant related genes	Relation type
ENSG00000207990	Chromatin interaction

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs16873739	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2280680	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs3807118	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4728179	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4731634	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4731636	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs62491490	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62491495	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62491519	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs62491520	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs62491531	0.89[AMR][1000 genomes]
rs62491534	0.89[AMR][1000 genomes]
rs62491535	0.89[AMR][1000 genomes]
rs62491538	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs62491540	0.89[AMR][1000 genomes]
rs62491541	0.89[AMR][1000 genomes]

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:129445200-129464600	Weak transcription	Right Atrium	heart
2	chr7:129445600-129464200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr7:129445600-129464600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr7:129453800-129460000	Weak transcription	Aorta	Aorta
5	chr7:129456200-129461600	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr7:129456800-129464600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr7:129457000-129464400	Weak transcription	HMEC	breast
8	chr7:129457200-129464200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr7:129457400-129461200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr7:129457400-129464800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr7:129457600-129464600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr7:129457600-129464600	Weak transcription	Fetal Brain Female	brain
13	chr7:129457800-129464600	Weak transcription	HSMM	muscle
14	chr7:129458000-129464400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr7:129458000-129464600	Weak transcription	Brain Inferior Temporal Lobe	brain
16	chr7:129458200-129459600	Weak transcription	HSMMtube	muscle
17	chr7:129458200-129461200	Weak transcription	Brain Angular Gyrus	brain
18	chr7:129458200-129462200	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr7:129458200-129464200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr7:129458400-129464200	Weak transcription	Hela-S3	cervix
21	chr7:129458800-129461600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
22	chr7:129459000-129464600	Weak transcription	Brain Cingulate Gyrus	brain
23	chr7:129459400-129464600	Weak transcription	Pancreas	Pancrea

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