Variant report

Variant	rs4731634
Chromosome Location	chr7:129461316-129461317
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:129303349..129305568-chr7:129461167..129463400,2	K562	blood:
2	chr7:129454177..129456052-chr7:129461153..129463544,2	K562	blood:
3	chr7:129443362..129446037-chr7:129458801..129461329,2	K562	blood:
4	chr7:129415990..129422927-chr7:129459994..129470946,26	MCF-7	breast:

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs16873739	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2280680	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2727456	0.94[ASN][1000 genomes]
rs3807118	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3807119	0.83[EUR][1000 genomes]
rs4728179	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4731633	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4731636	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62491490	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62491495	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs62491500	0.85[EUR][1000 genomes]
rs62491519	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62491520	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62491531	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs62491534	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs62491535	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs62491538	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs62491540	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs62491541	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:129445200-129464600	Weak transcription	Right Atrium	heart
2	chr7:129445600-129464200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr7:129445600-129464600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr7:129456200-129461600	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr7:129456800-129464600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr7:129457000-129464400	Weak transcription	HMEC	breast
7	chr7:129457200-129464200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr7:129457400-129464800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr7:129457600-129464600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr7:129457600-129464600	Weak transcription	Fetal Brain Female	brain
11	chr7:129457800-129464600	Weak transcription	HSMM	muscle
12	chr7:129458000-129464400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr7:129458000-129464600	Weak transcription	Brain Inferior Temporal Lobe	brain
14	chr7:129458200-129462200	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr7:129458200-129464200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr7:129458400-129464200	Weak transcription	Hela-S3	cervix
17	chr7:129458800-129461600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
18	chr7:129459000-129464600	Weak transcription	Brain Cingulate Gyrus	brain
19	chr7:129459400-129464600	Weak transcription	Pancreas	Pancrea
20	chr7:129459600-129462200	Enhancers	Fetal Muscle Leg	muscle
21	chr7:129460000-129462400	Enhancers	Fetal Muscle Trunk	muscle
22	chr7:129460000-129464600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr7:129460400-129464600	Weak transcription	Fetal Brain Male	brain
24	chr7:129460400-129464600	Weak transcription	Fetal Stomach	stomach
25	chr7:129460600-129464600	Weak transcription	Right Ventricle	heart
26	chr7:129460800-129464600	Weak transcription	NH-A	brain
27	chr7:129461000-129462400	Enhancers	Fetal Heart	heart
28	chr7:129461000-129464400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
29	chr7:129461000-129464600	Weak transcription	Ovary	ovary
30	chr7:129461000-129464600	Weak transcription	NHDF-Ad	bronchial
31	chr7:129461000-129464800	Weak transcription	Brain Substantia Nigra	brain
32	chr7:129461200-129461400	Strong transcription	Aorta	Aorta
33	chr7:129461200-129462200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
34	chr7:129461200-129462200	Strong transcription	Brain Angular Gyrus	brain
35	chr7:129461200-129462200	Enhancers	HSMMtube	muscle
36	chr7:129461200-129464600	Weak transcription	NHEK	skin

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