Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10086241	0.83[ASN][1000 genomes]
rs10086336	0.83[ASN][1000 genomes]
rs10086467	0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs10091818	0.85[ASN][1000 genomes]
rs12541987	0.84[ASN][1000 genomes]
rs12546710	0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs13439018	0.81[ASN][1000 genomes]
rs13439823	0.81[ASN][1000 genomes]
rs1433172	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1433185	0.85[ASN][1000 genomes]
rs1433187	0.85[ASN][1000 genomes]
rs17301273	0.88[ASN][1000 genomes]
rs17302560	0.88[EUR][1000 genomes]
rs17302982	0.85[ASN][1000 genomes]
rs1836031	0.90[ASN][1000 genomes]
rs28577060	0.85[ASN][1000 genomes]
rs3847160	0.86[ASN][1000 genomes]
rs4100190	0.86[ASN][1000 genomes]
rs4114169	0.86[ASN][1000 genomes]
rs41323951	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4734967	0.81[ASN][1000 genomes]
rs56163052	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6469113	0.85[ASN][1000 genomes]
rs7816817	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv465760	chr8:108224687-108485912	Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv611851	chr8:108224687-108485912	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:108473200-108479800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr8:108474800-108481000	Weak transcription	Aorta	Aorta
3	chr8:108474800-108483400	Weak transcription	Psoas Muscle	Psoas
4	chr8:108475200-108481200	Weak transcription	Fetal Lung	lung
5	chr8:108475200-108481800	Weak transcription	Colon Smooth Muscle	Colon
6	chr8:108475400-108481800	Weak transcription	Osteobl	bone
7	chr8:108475600-108478800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
8	chr8:108477200-108485000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr8:108477200-108489200	Weak transcription	Primary hematopoietic stem cells	blood
10	chr8:108477800-108478200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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