Variant report

Variant	rs4744062
Chromosome Location	chr9:94341216-94341217
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs16907611	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16907651	0.94[CHB][hapmap];0.89[JPT][hapmap]
rs1890975	1.00[CHB][hapmap];0.89[JPT][hapmap];1.00[EUR][1000 genomes]
rs4743844	1.00[CHB][hapmap];1.00[EUR][1000 genomes]
rs4743846	1.00[CHB][hapmap];0.89[JPT][hapmap];1.00[EUR][1000 genomes]
rs4744064	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4744087	1.00[CHB][hapmap];0.89[JPT][hapmap]
rs9409429	0.83[CHB][hapmap]
rs9409430	0.83[CHB][hapmap]
rs9409609	0.83[CHB][hapmap]
rs9409610	0.82[CHB][hapmap]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:94335600-94347000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr9:94335800-94344800	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr9:94338400-94341400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr9:94340200-94342400	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr9:94340400-94342400	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr9:94340400-94343000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr9:94340600-94341400	Enhancers	Fetal Intestine Large	intestine
8	chr9:94341000-94342200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr9:94341000-94342800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr9:94341200-94341400	Enhancers	Rectal Smooth Muscle	rectum
11	chr9:94341200-94342400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr9:94341200-94342600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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