Variant report

Variant	rs9409610
Chromosome Location	chr9:94341698-94341699
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:94333406..94335605-chr9:94340946..94342619,2	K562	blood:

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10114204	0.89[ASN][1000 genomes]
rs10116888	0.94[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs12336409	0.87[ASN][1000 genomes]
rs12338549	0.82[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs12341194	0.89[ASN][1000 genomes]
rs16907611	0.82[CHB][hapmap]
rs1890975	0.81[CHB][hapmap]
rs4743841	0.89[ASN][1000 genomes]
rs4743844	0.81[CHB][hapmap]
rs4743846	0.82[CHB][hapmap]
rs4744058	0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4744061	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4744062	0.82[CHB][hapmap]
rs4744064	0.82[CHB][hapmap]
rs4744070	0.94[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs4744087	0.82[CHB][hapmap]
rs61667734	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6479365	0.89[ASN][1000 genomes]
rs7850575	0.94[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs9409429	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9409430	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9409606	0.93[CEU][hapmap];0.83[EUR][1000 genomes]
rs9409607	0.83[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs9409608	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9409609	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:94335600-94347000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr9:94335800-94344800	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr9:94340200-94342400	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr9:94340400-94342400	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr9:94340400-94343000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr9:94341000-94342200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr9:94341000-94342800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr9:94341200-94342400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr9:94341200-94342600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr9:94341400-94342400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr9:94341400-94342400	Weak transcription	Rectal Smooth Muscle	rectum

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