Variant report

Variant	rs4751614
Chromosome Location	chr10:118696266-118696267
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10886017	0.85[AMR][1000 genomes]
rs11197861	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11598817	0.81[EUR][1000 genomes]
rs1905539	0.91[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2257791	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4638225	0.81[EUR][1000 genomes]
rs4752018	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6585422	0.82[EUR][1000 genomes]
rs7079724	0.81[EUR][1000 genomes]
rs7089699	0.81[EUR][1000 genomes]
rs7902527	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4751614	KIAA1598	cis	Whole Blood	GTEx

Chromatin state (count:64 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118648800-118698600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr10:118649200-118698400	Weak transcription	Esophagus	oesophagus
3	chr10:118651800-118706600	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr10:118652000-118736200	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr10:118653200-118706800	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr10:118653400-118707600	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr10:118659200-118697800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr10:118659200-118697800	Weak transcription	Fetal Stomach	stomach
9	chr10:118663800-118707000	Weak transcription	Stomach Smooth Muscle	stomach
10	chr10:118667200-118698800	Weak transcription	Placenta	Placenta
11	chr10:118667400-118703200	Weak transcription	Aorta	Aorta
12	chr10:118671000-118702800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr10:118672000-118698000	Weak transcription	Rectal Mucosa Donor 31	rectum
14	chr10:118673000-118698600	Weak transcription	Gastric	stomach
15	chr10:118673000-118706400	Weak transcription	NH-A	brain
16	chr10:118673800-118706400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
17	chr10:118674200-118697800	Weak transcription	Fetal Intestine Small	intestine
18	chr10:118675000-118706600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr10:118678000-118706600	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr10:118679800-118698600	Weak transcription	Adipose Nuclei	Adipose
21	chr10:118680000-118698000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
22	chr10:118680000-118699000	Weak transcription	K562	blood
23	chr10:118680000-118706800	Weak transcription	H1 Cell Line	embryonic stem cell
24	chr10:118680400-118698400	Weak transcription	Sigmoid Colon	Sigmoid Colon
25	chr10:118680400-118698800	Weak transcription	NHEK	skin
26	chr10:118680800-118698200	Weak transcription	Ovary	ovary
27	chr10:118680800-118703200	Weak transcription	HMEC	breast
28	chr10:118681000-118698000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr10:118681000-118698600	Weak transcription	Duodenum Mucosa	Duodenum
30	chr10:118681000-118698800	Weak transcription	Hela-S3	cervix
31	chr10:118686800-118698200	Weak transcription	Rectal Mucosa Donor 29	rectum
32	chr10:118687200-118698000	Weak transcription	Brain Cingulate Gyrus	brain
33	chr10:118687200-118706600	Weak transcription	HUES48 Cell Line	embryonic stem cell
34	chr10:118687600-118697600	Weak transcription	Brain Inferior Temporal Lobe	brain
35	chr10:118688400-118702600	Weak transcription	HUVEC	blood vessel
36	chr10:118689800-118702800	Weak transcription	HepG2	liver
37	chr10:118690200-118699400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chr10:118690200-118706400	Weak transcription	HSMM	muscle
39	chr10:118690400-118697800	Weak transcription	Fetal Intestine Large	intestine
40	chr10:118691800-118697800	Weak transcription	Primary monocytes fromperipheralblood	blood
41	chr10:118691800-118698600	Weak transcription	Brain Angular Gyrus	brain
42	chr10:118691800-118698600	Weak transcription	Lung	lung
43	chr10:118692000-118697800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
44	chr10:118692000-118697800	Weak transcription	Pancreas	Pancrea
45	chr10:118692000-118698000	Weak transcription	Brain Anterior Caudate	brain
46	chr10:118692000-118698800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
47	chr10:118692200-118696600	Weak transcription	A549	lung
48	chr10:118692200-118697400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
49	chr10:118692200-118697600	Weak transcription	Liver	Liver
50	chr10:118692200-118698000	Weak transcription	Brain Substantia Nigra	brain

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