Variant report

Variant	rs4751970
Chromosome Location	chr10:118217042-118217043
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10749215	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11197685	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11197692	0.81[AMR][1000 genomes]
rs1897515	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1897516	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7074313	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs891665	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832001	chr10:118138370-118315059	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118202000-118225400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr10:118202200-118224000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr10:118212800-118218400	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr10:118214200-118225200	Strong transcription	HMEC	breast
5	chr10:118214800-118217200	Strong transcription	NHEK	skin
6	chr10:118216200-118217200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr10:118216200-118219200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr10:118216400-118217400	Enhancers	Primary hematopoietic stem cells short term culture	blood
9	chr10:118216400-118219200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr10:118216600-118217200	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr10:118216600-118223800	Weak transcription	Pancreas	Pancrea
12	chr10:118216800-118217200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr10:118216800-118217600	Enhancers	Monocytes-CD14+_RO01746	blood
14	chr10:118217000-118220400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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