Variant report

Variant	rs4752813
Chromosome Location	chr11:46909746-46909747
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs4752812	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4752948	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4752949	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61741501	1.00[AMR][1000 genomes]
rs6485703	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6485704	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs7118028	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs7119536	0.89[AMR][1000 genomes]
rs7926667	1.00[AMR][1000 genomes]
rs879720	1.00[AMR][1000 genomes]
rs879721	1.00[AMR][1000 genomes]

No data

Chromatin state (count:87 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:46868600-46917400	Weak transcription	Fetal Brain Male	brain
2	chr11:46868800-46913000	Weak transcription	A549	lung
3	chr11:46875600-46917200	Strong transcription	Cortex derived primary cultured neurospheres	brain
4	chr11:46876600-46911400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr11:46876600-46916600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
6	chr11:46877400-46912000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr11:46877400-46912600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
8	chr11:46877600-46919000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr11:46877800-46912200	Strong transcription	Fetal Stomach	stomach
10	chr11:46877800-46912400	Strong transcription	HUES64 Cell Line	embryonic stem cell
11	chr11:46878400-46922000	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr11:46879800-46918200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
13	chr11:46880800-46910800	Strong transcription	Fetal Muscle Trunk	muscle
14	chr11:46886000-46921800	Weak transcription	Hela-S3	cervix
15	chr11:46887600-46918600	Weak transcription	NHDF-Ad	bronchial
16	chr11:46895400-46917400	Weak transcription	NHLF	lung
17	chr11:46896600-46928200	Weak transcription	Fetal Heart	heart
18	chr11:46897400-46921800	Weak transcription	HMEC	breast
19	chr11:46897600-46916800	Weak transcription	Psoas Muscle	Psoas
20	chr11:46897600-46917200	Weak transcription	Rectal Smooth Muscle	rectum
21	chr11:46898600-46914400	Weak transcription	Colon Smooth Muscle	Colon
22	chr11:46898600-46916600	Weak transcription	Liver	Liver
23	chr11:46898800-46916600	Weak transcription	Gastric	stomach
24	chr11:46898800-46920000	Weak transcription	Stomach Mucosa	stomach
25	chr11:46899000-46910400	Weak transcription	NHEK	skin
26	chr11:46899000-46916000	Weak transcription	Rectal Mucosa Donor 31	rectum
27	chr11:46899600-46914200	Weak transcription	Brain Germinal Matrix	brain
28	chr11:46900400-46914600	Weak transcription	Sigmoid Colon	Sigmoid Colon
29	chr11:46900800-46923400	Weak transcription	Aorta	Aorta
30	chr11:46901000-46913400	Weak transcription	Right Ventricle	heart
31	chr11:46901400-46917400	Weak transcription	NH-A	brain
32	chr11:46903000-46912000	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
33	chr11:46905000-46912000	Strong transcription	Stomach Smooth Muscle	stomach
34	chr11:46905000-46917800	Weak transcription	Right Atrium	heart
35	chr11:46905200-46912000	Strong transcription	Brain Substantia Nigra	brain
36	chr11:46905200-46912200	Strong transcription	Fetal Intestine Small	intestine
37	chr11:46905600-46917400	Weak transcription	Esophagus	oesophagus
38	chr11:46905600-46922600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr11:46906600-46911000	Strong transcription	Brain Inferior Temporal Lobe	brain
40	chr11:46907000-46921200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr11:46907800-46910800	Weak transcription	Pancreas	Pancrea
42	chr11:46908000-46910200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr11:46908000-46910400	Weak transcription	Duodenum Smooth Muscle	Duodenum
44	chr11:46908000-46910600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
45	chr11:46908000-46915200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
46	chr11:46908000-46916200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr11:46908000-46916800	Weak transcription	Lung	lung
48	chr11:46908000-46917400	Weak transcription	Colonic Mucosa	Colon
49	chr11:46908200-46910200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr11:46908200-46910400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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