Variant report

Variant	rs4755313
Chromosome Location	chr11:45320727-45320728
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1000664	0.94[CEU][hapmap];0.93[EUR][1000 genomes]
rs10742747	0.88[CEU][hapmap];0.87[EUR][1000 genomes]
rs11038391	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2863185	0.85[ASN][1000 genomes]
rs4755938	0.93[EUR][1000 genomes]
rs4755939	0.82[CEU][hapmap]
rs6416132	0.94[CEU][hapmap];0.92[EUR][1000 genomes]
rs6485612	0.96[ASN][1000 genomes]
rs7101799	0.94[CEU][hapmap];0.93[EUR][1000 genomes]
rs7108623	0.94[CEU][hapmap];0.93[EUR][1000 genomes]
rs72895359	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7478781	0.94[CEU][hapmap];0.93[EUR][1000 genomes]
rs7481764	0.94[CEU][hapmap];0.93[EUR][1000 genomes]
rs7940907	0.94[CEU][hapmap];0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530619	chr11:45294176-45553928	Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45320200-45320800	Enhancers	H1 Cell Line	embryonic stem cell
2	chr11:45320200-45320800	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr11:45320200-45320800	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr11:45320400-45320800	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr11:45320400-45320800	Enhancers	iPS-20b Cell Line	embryonic stem cell
6	chr11:45320400-45321000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr11:45320600-45320800	Enhancers	H9 Cell Line	embryonic stem cell
8	chr11:45320600-45320800	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr11:45320600-45320800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr11:45320600-45321800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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