Variant report

Variant	rs4755315
Chromosome Location	chr11:45349726-45349727
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10501312	1.00[AMR][1000 genomes]
rs10769144	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16926615	1.00[AMR][1000 genomes]
rs16938206	1.00[AMR][1000 genomes]
rs1873058	0.83[AFR][1000 genomes]
rs1906583	1.00[AFR][1000 genomes]
rs2863177	1.00[AMR][1000 genomes]
rs2902431	1.00[AMR][1000 genomes]
rs4462326	1.00[AMR][1000 genomes]
rs6485610	1.00[AMR][1000 genomes]
rs6485611	1.00[AMR][1000 genomes]
rs7394569	1.00[AMR][1000 genomes]
rs7481481	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs896329	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs896333	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530619	chr11:45294176-45553928	Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv975839	chr11:45346121-45350850	Enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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