Variant report

Variant	rs4755996
Chromosome Location	chr11:45500427-45500428
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:45488928..45491799-chr11:45499430..45501355,2	K562	blood:

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10769148	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10769149	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10769153	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10838477	0.92[ASN][1000 genomes]
rs11038480	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1157786	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12418768	0.81[ASN][1000 genomes]
rs12422148	0.86[ASN][1000 genomes]
rs1488667	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1530869	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1565222	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17195431	0.85[ASN][1000 genomes]
rs17788407	0.81[ASN][1000 genomes]
rs1825934	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2046734	0.81[ASN][1000 genomes]
rs2198151	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2198153	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2863700	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4755988	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4755992	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4755993	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4755995	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55713403	0.85[ASN][1000 genomes]
rs56681627	0.86[ASN][1000 genomes]
rs7115683	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs750995	0.85[ASN][1000 genomes]
rs7925329	0.80[ASN][1000 genomes]
rs7931481	0.86[ASN][1000 genomes]
rs7931858	0.86[ASN][1000 genomes]
rs7934345	0.87[ASN][1000 genomes]
rs896338	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs901900	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9787760	0.81[ASN][1000 genomes]
rs9787814	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530619	chr11:45294176-45553928	Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv1045831	chr11:45419113-45580407	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv1053919	chr11:45457920-45506491	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
4	nsv541027	chr11:45457920-45506491	Flanking Active TSS Enhancers ZNF genes & repeats Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
5	nsv897310	chr11:45487041-45631953	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45490200-45510800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr11:45495400-45504000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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