Variant report

Variant	rs4764729
Chromosome Location	chr12:103663275-103663276
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11111508	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11111512	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11111523	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11613843	0.82[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap]
rs12299934	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12306103	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12309101	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12315487	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12320856	0.82[CEU][hapmap]
rs1574503	0.82[CEU][hapmap]
rs17033611	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2374244	0.82[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv975641	chr12:103663103-103667663	Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:103662600-103663600	Enhancers	Primary T cells fromperipheralblood	blood
2	chr12:103662800-103666200	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr12:103663000-103663800	Enhancers	Primary T killer memory cells from peripheral blood	blood
4	chr12:103663000-103663800	Bivalent Enhancer	Dnd41	blood
5	chr12:103663200-103663600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
6	chr12:103663200-103663800	Enhancers	Primary T helper cells fromperipheralblood	blood
7	chr12:103663200-103664000	Enhancers	Primary T helper naive cells from peripheral blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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