Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12430272	0.92[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap]
rs2150471	0.88[CEU][hapmap];0.81[CHB][hapmap];0.88[CHD][hapmap];0.88[GIH][hapmap];0.95[JPT][hapmap];0.85[TSI][hapmap]
rs2183606	0.85[CHB][hapmap];0.95[JPT][hapmap]
rs2183607	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs4238301	0.86[ASN][1000 genomes]
rs4773668	0.81[CHB][hapmap];0.91[CHD][hapmap];0.90[JPT][hapmap]
rs4773670	0.92[ASW][hapmap];0.96[CEU][hapmap];0.91[CHB][hapmap];0.87[CHD][hapmap];0.97[GIH][hapmap];0.95[LWK][hapmap];0.91[MEX][hapmap];0.93[MKK][hapmap];0.93[TSI][hapmap];0.91[YRI][hapmap];0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6492586	0.81[CHB][hapmap];0.95[JPT][hapmap]
rs6492587	0.83[CHB][hapmap];0.90[JPT][hapmap]
rs6492589	0.95[CHB][hapmap];0.93[CHD][hapmap];1.00[JPT][hapmap]
rs66792168	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7320937	0.96[CEU][hapmap];0.85[JPT][hapmap]
rs7326950	0.82[YRI][hapmap]
rs7984409	0.83[YRI][hapmap]
rs7984422	0.91[YRI][hapmap]
rs7989907	0.95[CHB][hapmap];0.95[JPT][hapmap]
rs7992380	0.91[CEU][hapmap];0.81[CHB][hapmap];0.90[JPT][hapmap]
rs7993836	0.88[CEU][hapmap];0.86[CHB][hapmap];0.91[JPT][hapmap];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9516019	0.81[CHB][hapmap];0.85[JPT][hapmap]
rs9583996	0.83[CHB][hapmap];0.93[CHD][hapmap];0.95[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2756005	chr13:92584199-93080799	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv456066	chr13:92694581-92884370	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv562723	chr13:92694581-92884370	Flanking Active TSS Active TSS Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv1035365	chr13:92805325-92926114	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv1053468	chr13:92814581-92893231	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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