Variant report
| Variant | rs4775201 |
|---|---|
| Chromosome Location | chr15:60029599-60029600 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
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| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000140299 | Chromatin interaction |
| ENSG00000259238 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:8)
| rs_ID | r2[population] |
|---|---|
| rs11071476 | 0.88[ASN][1000 genomes] |
| rs11635056 | 0.83[ASN][1000 genomes] |
| rs1437472 | 0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];0.80[ASN][1000 genomes] |
| rs1479882 | 0.81[ASN][1000 genomes] |
| rs4620904 | 0.82[AMR][1000 genomes] |
| rs6494144 | 0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[ASN][1000 genomes] |
| rs7171591 | 0.82[AMR][1000 genomes] |
| rs9673028 | 0.84[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv984219 | chr15:60026752-60043941 | Enhancers | Chromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
