Variant report

Variant	rs11635056
Chromosome Location	chr15:60033495-60033496
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11071476	0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1437472	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1437487	0.80[CEU][hapmap]
rs1479882	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2414645	1.00[CEU][hapmap]
rs28593065	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4775201	0.83[ASN][1000 genomes]
rs4775202	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4775205	0.83[CEU][hapmap];0.90[CHD][hapmap];0.82[MEX][hapmap];0.82[TSI][hapmap]
rs6494144	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7163623	0.83[CEU][hapmap];0.91[CHD][hapmap];0.82[MEX][hapmap];0.87[TSI][hapmap]
rs8032951	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[CHD][hapmap];0.95[JPT][hapmap];0.88[MEX][hapmap];0.95[TSI][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs965353	0.83[CEU][hapmap];0.81[MEX][hapmap];0.83[TSI][hapmap]
rs965355	0.83[CEU][hapmap];0.91[CHD][hapmap];0.82[MEX][hapmap];0.87[TSI][hapmap]
rs9673028	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv984219	chr15:60026752-60043941	Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:60030000-60034400	Enhancers	Liver	Liver
2	chr15:60033200-60033800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr15:60033400-60033800	Enhancers	Fetal Intestine Small	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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