The 2.0 version of rSNPBase

Variant report

Variant rs4805630
Chromosome Location chr19:28287147-28287148
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:28285800-28303200 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr19:28286000-28287200 Enhancers Primary T helper cells fromperipheralblood blood
3 chr19:28286000-28287200 Enhancers Primary T killer naive cells fromperipheralblood blood
4 chr19:28286000-28288800 Weak transcription Aorta Aorta
5 chr19:28286000-28289000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr19:28286000-28289400 Weak transcription Placenta Amnion Placenta Amnion
7 chr19:28286000-28294400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr19:28286000-28294400 Weak transcription Fetal Kidney kidney
9 chr19:28286000-28296800 Weak transcription NH-A brain
10 chr19:28286000-28297400 Weak transcription H9 Cell Line embryonic stem cell
11 chr19:28286000-28298400 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr19:28286200-28287200 Enhancers Breast Myoepithelial Primary Cells Breast
13 chr19:28286200-28287600 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr19:28286200-28288400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr19:28286200-28288400 Weak transcription Fetal Intestine Small intestine
16 chr19:28286200-28288400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr19:28286200-28288600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr19:28286200-28288800 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr19:28286200-28290000 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr19:28286200-28291600 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr19:28286200-28291800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr19:28286200-28294400 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr19:28286200-28295800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr19:28286200-28296400 Weak transcription Muscle Satellite Cultured Cells --
25 chr19:28286200-28296400 Weak transcription Osteobl bone
26 chr19:28286200-28298200 Weak transcription HSMMtube muscle
27 chr19:28286200-28298800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr19:28286200-28298800 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr19:28286400-28288400 Weak transcription Primary hematopoietic stem cells blood
30 chr19:28286400-28288400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr19:28286400-28288400 Weak transcription Thymus Thymus
32 chr19:28286400-28288600 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr19:28286400-28288800 Weak transcription Fetal Muscle Leg muscle
34 chr19:28286400-28290400 Weak transcription Colon Smooth Muscle Colon
35 chr19:28286400-28291800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr19:28286400-28294400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr19:28286400-28294400 Weak transcription Fetal Brain Male brain
38 chr19:28286400-28294400 Weak transcription NHEK skin
39 chr19:28286400-28295800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr19:28286400-28295800 Weak transcription Fetal Thymus thymus
41 chr19:28286400-28296000 Weak transcription Rectal Smooth Muscle rectum
42 chr19:28286400-28296800 Weak transcription Adipose Nuclei Adipose
43 chr19:28286400-28299400 Weak transcription Brain Anterior Caudate brain
44 chr19:28286600-28287200 Genic enhancers A549 lung
45 chr19:28286600-28288400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr19:28286600-28288400 Weak transcription Esophagus oesophagus
47 chr19:28286600-28288600 Weak transcription Primary neutrophils fromperipheralblood blood
48 chr19:28286600-28288600 Weak transcription Primary T cells from cord blood blood
49 chr19:28286600-28288600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr19:28286600-28288600 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015