Variant report

Variant rs10402862
Chromosome Location chr19:28268380-28268381
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:28246600-28272000 ZNF genes & repeats Fetal Brain Female brain
2 chr19:28258800-28272000 ZNF genes & repeats Brain Germinal Matrix brain
3 chr19:28261000-28269200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr19:28261600-28283400 Weak transcription Psoas Muscle Psoas
5 chr19:28262200-28271800 ZNF genes & repeats Aorta Aorta
6 chr19:28263000-28269800 Strong transcription HSMMtube muscle
7 chr19:28263200-28268400 ZNF genes & repeats Primary hematopoietic stem cells blood
8 chr19:28263200-28268400 ZNF genes & repeats Pancreas Pancrea
9 chr19:28263400-28268400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr19:28263400-28268400 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
11 chr19:28263400-28268600 ZNF genes & repeats Duodenum Mucosa Duodenum
12 chr19:28263400-28269000 ZNF genes & repeats Liver Liver
13 chr19:28263600-28268600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr19:28263600-28268800 ZNF genes & repeats Fetal Brain Male brain
15 chr19:28263600-28272000 ZNF genes & repeats Fetal Lung lung
16 chr19:28263800-28270400 ZNF genes & repeats A549 lung
17 chr19:28264000-28270400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr19:28264200-28272200 ZNF genes & repeats Fetal Stomach stomach
19 chr19:28264600-28269800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
20 chr19:28264800-28269000 Strong transcription Breast Myoepithelial Primary Cells Breast
21 chr19:28264800-28269400 Weak transcription Brain Anterior Caudate brain
22 chr19:28264800-28281600 Weak transcription Muscle Satellite Cultured Cells --
23 chr19:28264800-28283600 Weak transcription Brain Substantia Nigra brain
24 chr19:28264800-28283800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr19:28265000-28270000 Weak transcription Fetal Heart heart
26 chr19:28265000-28270200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr19:28265000-28271800 Weak transcription Right Ventricle heart
28 chr19:28265000-28272600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr19:28265000-28272600 Weak transcription Brain Angular Gyrus brain
30 chr19:28265000-28283400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr19:28265200-28276600 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr19:28265200-28281600 Weak transcription HMEC breast
33 chr19:28265200-28283200 Weak transcription Brain Inferior Temporal Lobe brain
34 chr19:28265200-28283600 Weak transcription Brain Hippocampus Middle brain
35 chr19:28266000-28270800 Weak transcription Primary B cells from cord blood blood
36 chr19:28266000-28282800 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr19:28266600-28271400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr19:28266600-28282200 Weak transcription Rectal Smooth Muscle rectum
39 chr19:28266600-28282600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr19:28266600-28283400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr19:28266800-28268600 Weak transcription Brain Cingulate Gyrus brain
42 chr19:28266800-28282800 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr19:28267000-28268400 ZNF genes & repeats Ovary ovary
44 chr19:28267200-28270000 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr19:28267200-28281600 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr19:28267200-28281600 Weak transcription Dnd41 blood
47 chr19:28267400-28268600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr19:28267400-28281600 Weak transcription K562 blood
49 chr19:28267600-28268400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr19:28267600-28268400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --

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